| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3969 |
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| Symbol | |
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| ID | 6162380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4457362 |
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| End bp | 4457892 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666747 |
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| Product | CheW protein |
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| Protein accession | YP_001792988 |
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| Protein GI | 171060639 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00946011 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAACA AGGAAGCGCT GCGCGAATTG CAAGGCCGGC TGGCCGAGCG CCTGCACGAG
GTCAAGACCC AGGAGCGCAC GCTCTCCTGG CTGGCGGTCG AGTCCGGAGG CCACGGCTTC
CTGTTGCCGC TGGCCGAGGC CGGCGAGATC TTCCAGCCCG GCGCGCTGCT GTCGGTGCCG
CACGCGCTAC CGTGGTTTCT GGGTGTTGCC AACCTGCGCG GCGTGCTTGC AGGGGTGGTC
GATCTGGCAG GATTTCTCGG ATTGCGCTCC CGGCTGCCCG AAGGCGAGCG CGATCAGGCA
CGGGTCGTCG CCTTCAACCC GACACTCGAG ATCAACGGCG CCTTGCAGGT CGATCGGCTG
GCGGGCTTGC GCAACCAGAC TCAGCTCACG CCCGAGGCGG TCGATGTGCA TGCTCAGCCC
GGCTTTGTCG GCGGTCGCTA CCACGACGCC GGCGGTCGGG TCTGGCAAGA GTTGCGGCTG
GCCGTGCTGG CCCGCGACGA GCGCTTTCTT CGCATCGTCA AGGGTGCGTG A
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| Protein sequence | MANKEALREL QGRLAERLHE VKTQERTLSW LAVESGGHGF LLPLAEAGEI FQPGALLSVP
HALPWFLGVA NLRGVLAGVV DLAGFLGLRS RLPEGERDQA RVVAFNPTLE INGALQVDRL
AGLRNQTQLT PEAVDVHAQP GFVGGRYHDA GGRVWQELRL AVLARDERFL RIVKGA
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