| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3959 |
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| Symbol | pyrB |
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| ID | 6162384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4438158 |
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| End bp | 4439120 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666737 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001792978 |
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| Protein GI | 171060629 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000352812 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCTCGC GTCGCAACCC CCAGCTCAAC AACCACGGCG AGCTGATCCA CCTGCTGTCG
ACCGAAGGCC TGCCACGCGC CGTGCTGACG CAGATCCTCG ACACCGCCAG CACCTTTCTG
TCGGTCAACG ACCGTGACGT CAAGAAGGTG CCGCTGCTGC GGGGCAAGAG CGTGTTCAAC
CTGTTCTTCG AGAACAGCAC GCGCACCCGC ACCACCTTCG AGATCGCCGC CAAGCGGCTG
TCGGCCGACG TCATCAACCT CGACATCGCC AAGAGCAGCG CGGCCAAGGG CGAGAGCCTG
CTCGACACCA TCGCCAACTT GAGCGCGATG CACGCCGACA TGTTCGTGGT GCGCCACAGC
GAGAGCGGTG CGCCGTATCT CATCGCCGAG CACTGCGCGC CGCACGTGCA CGTGGTCAAC
GCCGGCGACG GCCGCCACGC GCACCCGACG CAGGGGCTGC TCGACATGTA CACGATCCGC
CACTACAAGA AGGACTTCAC CGGGCTGCGG GTGGCGATCG TGGGCGACAT CGTGCACAGC
CGCGTGGCGC GCTCGGACAT CCACGCGCTG ACCACGCTGG GCGTGCCCGA CATCCGCGCC
GTCGGCCCCA AGACCCTGGT GCCGGGCGAC CTGCGCGACA TGGGCGTGCG GGTGTGCCAC
GACATGGCCG AGGGCATCAA GGATGCCGAC GTCATCATCA TGCTGCGCCT GCAGAACGAG
CGCATGAGCG GCGCGATGCT GCCCAGCGCG GGCGAGTACT TCAAGAGCTA CGGCCTGACC
GCCGACAAGC TGGCGCTGGC CGCGCCGGAC TGCATCGTGA TGCACCCGGG GCCGATCAAC
CGCGGCGTCG AGATCGAGTC GACCGTGGCC GATGGCGCGC ACAGCGTGAT CCTGCCGCAG
GTCACCTTCG GCATCGCCGT GCGCATGGCG GTCATGTCCA TCATCGCGGG TAACGACGCA
TGA
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| Protein sequence | MLSRRNPQLN NHGELIHLLS TEGLPRAVLT QILDTASTFL SVNDRDVKKV PLLRGKSVFN
LFFENSTRTR TTFEIAAKRL SADVINLDIA KSSAAKGESL LDTIANLSAM HADMFVVRHS
ESGAPYLIAE HCAPHVHVVN AGDGRHAHPT QGLLDMYTIR HYKKDFTGLR VAIVGDIVHS
RVARSDIHAL TTLGVPDIRA VGPKTLVPGD LRDMGVRVCH DMAEGIKDAD VIIMLRLQNE
RMSGAMLPSA GEYFKSYGLT ADKLALAAPD CIVMHPGPIN RGVEIESTVA DGAHSVILPQ
VTFGIAVRMA VMSIIAGNDA
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