| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3958 |
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| Symbol | |
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| ID | 6162574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4436753 |
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| End bp | 4438078 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666736 |
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| Product | putative dihydroorotase-like protein |
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| Protein accession | YP_001792977 |
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| Protein GI | 171060628 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00167929 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATCC TCATCAAGAA CGGCCGGGTG ATCGACCCGG CCTCGGGCCG CGACGAGCTG
GCCGACATCG CCATCGCCGC CGGCCGCATC GTCACGATCG GGCGCATCTC GCCCGAGTTC
CAGGCCAATC GCGTGATCGA CGCCGCCGGC TGCGTGGTCG CGCCCGGTCT GGTCGACCTG
GCGGCGCGCC TGCGCGAACC GGGCGAAGAG CAGAAGGGCA TGCTCGAGAG CGAGCTCAAC
GCGGCGGCGG CCGGCGGCGT GACCAGCCTG GTCTGCCCGC CCGACACCGA TCCGGTGCTC
GACGAGCCCG GCCTGGTCGA GATGCTGAAG TTCCGCGCCC GCAAGCTCAG CCTGTGCCGG
CTGTTCCCGC TCGGCGCGCT GACACGCGGG CTCCAGGGCC AGGTGCTGAC CGAGATGGTC
GAGCTGACCG AGGCCGGCTG CGTCGGCTTC TCGCAGGCCG AGGTGCCGGT GCAGGACACC
CTCGCGCTGC AGCGCGCGAT GCTCTACGCC GCCACCCACG ACTTCACCGT CTGGCTGCGT
CCGCAGGACT ACTGGCTCGG CAAGGGCGTG GCCGCCAGCG GCGGCGTGGC GACGCGGCTG
GGCCTGTCGG GCGTGCCGGT GATGGCCGAG ACGATCGCGC TGCACACGCT GTTCGAGCTG
GTGCGCGTGA CCGGCGCGCG CCTGCACCTG TGCCGGCTGT CGAGCGCGGC CGGCGTGGCG
CTGCTGCGCG CGGCCAAGGC CGAGGGCCTG CGCGTGACGG CCGACGTCAG CATCAACTCG
CTGCACCTCA CCGACATCGA CATCGGCTAC TTCAACTCGT CGATGCGCCT GATGCCGCCG
CTGCGCCAGG GCCGCGACCG CGACGCGCTG CGCGCCGCGC TGGCCGACGG CACGATCGAC
GCGCTGGTGT CCGACCACAC GCCGGTCGAG GGCGACGCCA AGACGCTGCC GTTCGCCGAA
GCCGAACCCG GCGCCACCGG CCTGGAGCTG CTGCTGAGCC TGGCGCTCAA GTGGGGCACC
GACGCCGGCC TGGGCCTGCC GGCGACGCTG GCGCGGGTCA CGTCCGAACC GGTGCGGGTG
CTCGGCGATG CGCTGGGCTC GCTGTCGTCG AGCGCCGGCC GGCTGGTCGA AGGCGGCGTG
GCCGACGTCT GCGTGTTCGA TCCGGCCGCG ACCTGGGCCG TCACGCCCGA CGTGCTGTGC
AGCCAGGGCA AGCACACGCC GTTCGCGTTT GCCGACACCG GCATGGCGCT GCCCGGGCGC
GTGCGCGCCA CGCTGGTGGC CGGCACGGTG GCCCACGAGC TGCGCGCCGA CGCATGCGTG
CGGTGA
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| Protein sequence | MKILIKNGRV IDPASGRDEL ADIAIAAGRI VTIGRISPEF QANRVIDAAG CVVAPGLVDL
AARLREPGEE QKGMLESELN AAAAGGVTSL VCPPDTDPVL DEPGLVEMLK FRARKLSLCR
LFPLGALTRG LQGQVLTEMV ELTEAGCVGF SQAEVPVQDT LALQRAMLYA ATHDFTVWLR
PQDYWLGKGV AASGGVATRL GLSGVPVMAE TIALHTLFEL VRVTGARLHL CRLSSAAGVA
LLRAAKAEGL RVTADVSINS LHLTDIDIGY FNSSMRLMPP LRQGRDRDAL RAALADGTID
ALVSDHTPVE GDAKTLPFAE AEPGATGLEL LLSLALKWGT DAGLGLPATL ARVTSEPVRV
LGDALGSLSS SAGRLVEGGV ADVCVFDPAA TWAVTPDVLC SQGKHTPFAF ADTGMALPGR
VRATLVAGTV AHELRADACV R
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