| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3949 |
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| Symbol | |
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| ID | 6162935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4428507 |
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| End bp | 4428989 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666727 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792968 |
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| Protein GI | 171060619 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC GCGTTTCCAA GGCCTCCAAG GCCCGCCCGT CGCTGAGCCT GTCCCTGCAG
TTCGCCGATC CGCGCCATCG GGCGCAGCTG CCGCGCCACC ACGTGGCGCG CTGGATCCGC
GCCGCGCTCG AGCTGCCCGG CGAGTTCACC GTGCGCATCG TCGACGCCGA AGAGGCGCAA
GGCCTCAACC GCGACTACCG CGGCAAGGAC TACGCCACCA ACGTGCTCAC CTTCGACTAC
AGCGCCGAGC CGGTGGTGGC GGCCGATCTG GTGTTGTGCG CGCCGGTGGT CGAGGCCGAG
GCCGCGGCGG CCGGCAAGAC GCTGGTCGCG CACTACGCCC ACCTGCTGGT GCACGGCGCG
CTGCACGCCC AGGGCTACGA CCACGAAGAC GACGAAGAAG CCGCCGAGTG CATGGAAGCG
CGTGAGCGCG AGGTGCTGGC CGCGCTGGGT TTCGACGATC CGTACGCCGA GCCGGCGGCA
TGA
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| Protein sequence | MTQRVSKASK ARPSLSLSLQ FADPRHRAQL PRHHVARWIR AALELPGEFT VRIVDAEEAQ
GLNRDYRGKD YATNVLTFDY SAEPVVAADL VLCAPVVEAE AAAAGKTLVA HYAHLLVHGA
LHAQGYDHED DEEAAECMEA REREVLAALG FDDPYAEPAA
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