Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3921 |
Symbol | |
ID | 6161718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4406925 |
End bp | 4407434 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641666699 |
Product | CinA domain-containing protein |
Protein accession | YP_001792940 |
Protein GI | 171060591 |
COG category | [R] General function prediction only |
COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACG TCGAACAGCT CGAACACCAC GAGATACCGG CGCGGGTGCG GGCGATCAGC CTGCAACTGG TCGCCCGCCG GTGGCTGATG TGCACGGCCG AGAGCTGCAC CGGCGGCCTG ATCGCCGCGG CCTGCACCGA TCTGGCGGGT TCGAGCGACT GGTTCGAGCG CGGCATCGTC AGCTACAGCA ACGCGGCGAA GTGCGAGTTG CTGGGCGTGC CGGCCGACAC GATCGCCGCT CACGGCGCCG TCAGTTCGGC GGTTGCCGAG GCGATGGCAC GCGGCGCGCT GTCGCATTCG CACGCGCAGG TCGCGCTGGC GGTGACCGGC GTGGCCGGCC CGAGCGGCGG CAGCGTGGAC AAGCCGGTCG GCACGGTCTG GTTCGGCTGG GCCTTGCCCG GCGCGGCCTG GACCGCGAGG CAACGCTTCG ACGGCGACCG CCACGCGGTG CGGGTGCAGT CCGTCGCCCA CGCCTTGCAC GAACTCGACC GGGCGCTGCG GCGGGCCTGA
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Protein sequence | MNHVEQLEHH EIPARVRAIS LQLVARRWLM CTAESCTGGL IAAACTDLAG SSDWFERGIV SYSNAAKCEL LGVPADTIAA HGAVSSAVAE AMARGALSHS HAQVALAVTG VAGPSGGSVD KPVGTVWFGW ALPGAAWTAR QRFDGDRHAV RVQSVAHALH ELDRALRRA
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