| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3890 |
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| Symbol | |
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| ID | 6162049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4364113 |
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| End bp | 4364799 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666668 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001792909 |
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| Protein GI | 171060560 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA TGACCGCGAA ACACCTGTTG CGCGTCGCGC TGGCGGCGCT GGCGATCCAC
GCGGGCGGCC CGGCTGCCGC GCACGCGGAT GCGGCACATC CCGCCTCGAC GGCCGCGCCC
GCGGCCACCG AGACCCCGGC CGGCAAGGCC GCGAACGCCG CCAAGGCCGG CCCGCGCGAC
GCCGCCAGCT ACTTCACCGA ACTGGAGCTG CTGACCCAGG ACGGCCGCCG GGTGCGTTTC
CATTCGGACG TGCTGAAGGG CCGCACGGTG CTGATCAACG TGGTCTACGC CACCTGCCAG
GACGCCTGCC CGCTGATCAC GCAAAAGCTC AACGAGGTGC GCCAGCACCT GCCGGCCGAG
CTGTTCGGCA AGCAGGTGTT CTTCGTCTCG CTGACCTCCG ACCCGACGCA CGACACGCCG
CAGGCGCTCA AGGCGTTCGC GCGCAAGCAG GGCGCCGATG TCGAGGGCTG GACCTTTCTC
ACCGGGCGCA AGGAGAACGT CGAGCACATC CTCAAGAAGC TCGGTCAGTA TTCCGAGACC
GTCGAGGGCC ACTCGACGCT GCTGATCGCC GGCAACGTGC CGGCCAAGCG CTGGAGCAAG
ATCCGCCCCG ATGCGCCGCC TGCGGCCATC GCCGAACGGC TGAGCGTGCT GGCCACCGGC
GCCGGGCTCG ACGCGGCCCG GCCGTGA
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| Protein sequence | MMDMTAKHLL RVALAALAIH AGGPAAAHAD AAHPASTAAP AATETPAGKA ANAAKAGPRD
AASYFTELEL LTQDGRRVRF HSDVLKGRTV LINVVYATCQ DACPLITQKL NEVRQHLPAE
LFGKQVFFVS LTSDPTHDTP QALKAFARKQ GADVEGWTFL TGRKENVEHI LKKLGQYSET
VEGHSTLLIA GNVPAKRWSK IRPDAPPAAI AERLSVLATG AGLDAARP
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