Gene Lcho_3882 details

Gene Information

• Locus tag: Lcho_3882
• ID: 6163452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4356358
• End bp: 4356897
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 641666660
• Product: hypothetical protein
• Protein accession: YP_001792901
• Protein GI: 171060552

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCGCC TGCTGTGGTG GCTGCGCCGG CACGGCCAGC CATACGCGCT GACCGCGGGC 
CTGGCCCTGA TCGCCGCCGC GCTGGCGGCG CAATGGCTGG CGGTGGGGCC GCTGGGTCGG 
CAGATCGAGA CGGCGCAGAC GCAGCGCGAG CAGCGCGACG CCACGCTCGA ACGCATGAGC 
GACGCGCTGC TGCGCCAGGA TGCGCCGCAG GCCCGCCTCG ACCAGTTCTA CGGCCACTTC 
GCCACCCACG GCGCGCCGCT GGCGCTCGGG CTGGAACGGG TGCACGCGAT CGCCGCCGCC 
CACCAGCTCG AGATGAAACG CGCCGAGTAC CGCCTCAGCC ACCCGCCCGG CCAGAAGCTC 
GACCGCTACC GCATGGTGGT GCCGATCCAG GGCGACTACA CGACGCTGCG CGCCTTCGTC 
AGCGCGGTGC TGCGCGAGCT GCCGACGCTG TCGCTCGACC AGATCCAGCT GCAGCGCCAG 
GACATCGCCG ACGGCCGGCT CGACGCGCAG ATCACCTTGA CCTTCTACCT CGTGCCATGA 

 

Protein sequence

MNRLLWWLRR HGQPYALTAG LALIAAALAA QWLAVGPLGR QIETAQTQRE QRDATLERMS 
DALLRQDAPQ ARLDQFYGHF ATHGAPLALG LERVHAIAAA HQLEMKRAEY RLSHPPGQKL 
DRYRMVVPIQ GDYTTLRAFV SAVLRELPTL SLDQIQLQRQ DIADGRLDAQ ITLTFYLVP