| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3838 |
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| Symbol | hslU |
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| ID | 6161953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4301845 |
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| End bp | 4303200 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666611 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001792857 |
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| Protein GI | 171060508 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.672147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA CCCCGCAGGA AATCGTCGCC GAACTCGACC GTCACATCGT CGGCCAGCAA
CAAGCCAAGC GCGCGGTCGC GATCGCGCTG CGCAACCGCT GGCGGCGCCA GCAGGTCGAT
GACAAGCTGC GCGGCGAGAT CACGCCCAAG AACATCCTGA TGATCGGCCC CACCGGCGTG
GGCAAGACCG AGATCGCGCG CCGTCTGGCG CGACTGGCCG ATGCGCCGTT CATCAAGGTC
GAGGCCACCA AGTTCACCGA GGTCGGCTAT GTCGGCAAGG ACGTCGACTC GATCGTGCGC
GATCTGGTCG AAAGCGCCAT CAAGCAGGAG CGCGAACGCC AGGTGACGCT GATGCGCAGC
CGCGCCGAAG ACGCCGCCGA AGATCGCATC CTCGACATCC TGGTGCCGCC GCCACGCAGC
GCCGGCCGCA GCGACTTCGG TTTCCTCGAG CCCCAGGCCA CGCCAGCACC CGCGGCCGAC
AACACGGCCC GCCAGGTGAT GCGCAAGCGC CTGCGCGAAG GCACGCTCGA CGACAAGGAA
ATCGAGATCG ATCTGGCCGA CGCCAAGCCG ACGCTCGAGA TCATGGGCCC GGCCGGCATG
GAGGCGATGG CCGACCAGCT CAAGGGCCTG TTCTCGCAGA TGGGCCAGGG CAAGCGCCAG
CAGCGCAAGG TCAAGATCGG CGAGGCGCGC CGCCTGCTGG TCGACGAAGA AGCGCAGAAG
CTGGTCAACG AGGACGAAAC CCGCAGCCGC GCACTGCTGC ACACCGAGCA GAACGGCATC
GTCTTCATCG ACGAGATCGA CAAGGTCGCC AGCAGCGGCA ACACCCAGGG CGCCGACGTG
TCGCGCCAGG GCGTGCAGCG CGATCTGCTG CCGCTGGTCG AAGGCACCTC GGTGCAGACC
AAGTACGGTC TGGTCAAGAC CGACCACATC CTGTTCATCG CCTCGGGCGC GTTCCACGTC
TCCAAGCCGA GCGACCTGAT CCCCGAACTG CAGGGCCGGT TTCCGATCCG GGTCGAGCTG
CAGGCGCTGT CGGTCGACGA TTTCGAGGCG ATCCTGAGCA GCACCCACGC CAGCCTGATC
AAGCAGTACC AGGCGCTGCT GGCGACCGAA GGCGTGACGC TCGAGTTCGC CCCCGACGCC
GTGCGCCGCC TGGCGCAGAT CGCCTTCGAC GTCAACGAGC GCACCGAGAA CATCGGCGCG
CGCCGGCTGG CCACGGTGCT CGAACGGCTG CTCGACGAGA TCAGCTTCGA CGCCCCGGGC
CTGGCCGGCA GCACGGTGCA GATCGACGCC GCGCTGGTGG ACCGGAAGCT GGCCGAACTG
GCGGCCAACG AAGACCTGTC GCGCTACGTG CTGTAA
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| Protein sequence | MSLTPQEIVA ELDRHIVGQQ QAKRAVAIAL RNRWRRQQVD DKLRGEITPK NILMIGPTGV
GKTEIARRLA RLADAPFIKV EATKFTEVGY VGKDVDSIVR DLVESAIKQE RERQVTLMRS
RAEDAAEDRI LDILVPPPRS AGRSDFGFLE PQATPAPAAD NTARQVMRKR LREGTLDDKE
IEIDLADAKP TLEIMGPAGM EAMADQLKGL FSQMGQGKRQ QRKVKIGEAR RLLVDEEAQK
LVNEDETRSR ALLHTEQNGI VFIDEIDKVA SSGNTQGADV SRQGVQRDLL PLVEGTSVQT
KYGLVKTDHI LFIASGAFHV SKPSDLIPEL QGRFPIRVEL QALSVDDFEA ILSSTHASLI
KQYQALLATE GVTLEFAPDA VRRLAQIAFD VNERTENIGA RRLATVLERL LDEISFDAPG
LAGSTVQIDA ALVDRKLAEL AANEDLSRYV L
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