| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3818 |
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| Symbol | |
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| ID | 6160442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4282746 |
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| End bp | 4283912 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666591 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001792837 |
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| Protein GI | 171060488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.198752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTC TGTGGCGGCA CGCTGGACAA GTCAGTCTGG CCGTGGGCGC CTCGCTGGCC
GTGCAAGCGG CTCACGCGGT CAACGATCTG CCCGGCGGCC CCGGCGTGCG CCAGCTCGAT
CTGCCGGTCG GCGCCAGCAA GATGTCCGCC GACCTGCACT CGCTGCACTG GATCATGATG
GTCATCTGCA CGGTGATCTT CCTGGCCGTG TTCGGCGTGA TGTTCTATTC GATCATCAAG
CACCGCAAGT CCAAGGGCCA CAAGCCGGCC AACTTCCACG AGAGCGTGGC CGTCGAGATC
GCCTGGACGA TCGTGCCGTT CGTGATCGTG ATCGGCATGG GCGCGATGGC CACCAAGACG
GTGGTCGCGC AGAAGGACAC CACCAACGCC GACCTGACCA TCAAGGCCAC CGGCTACCAG
TGGAAGTGGG GCTACGACTA CCTCAAGGGC GAAGGCGAAG GCATCGCCTT CCTGTCGACG
CTCGACACCA GCCACCGCGC GATGTCCGAT TCGGGCAAGC CCGAAGCGAT CGACAACTAC
CTGTTGAAGG TCGACAACCC GCTGGTGGTG CCGGTCGACA AGAAGATCCG CATCATCACC
ACCGCCGACG ACGTGATCCA CGCCTTCATG GTGCCGCAGT TCGGCATCAA GCAGGACGCC
ATCCCCGGCT TCGTGCGCGA CACCTGGTTC CGCGCCGACA AGGTCGGCGA CTTCTACGGC
CAGTGCGCCG AGCTGTGCGG CAAGGAACAC GCCTACATGC CGATCCACGT GAAGGTGCTC
TCGGCGGTCG ACTACAGCGC CTGGGTCGAC GGCGAGAAGA AGAAGCTCGC CGCCCTGGCC
GATGATCCGG CCAAGGTCTG GAAGCTCGAC GAGCTGGTCG CCCGCGGCGA GAAGGTCTAC
GCCGCCAACT GCGCCGCCTG CCACCAGGCC AACGGCAAGG GTGCCGGCCC GATCAAGGCG
GTCGACGGCT CGCCGGTGGT GCTCGACGCC GACAAGACCC GGCAGATCGC GGTGCTGCTG
AACGGCCAGA ACAACGGCGC AATGCCGGCC TGGAAGCAGC TCTCGGACAC CGAGATCGCC
GCCGTCATCA CCTACACCAA GAACAACTGG TCGAACAAGA CCGGTCAGAT CGTGCAGCCG
GCCGACGTGG TCGCGGCCCG CAAGTAA
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| Protein sequence | MNALWRHAGQ VSLAVGASLA VQAAHAVNDL PGGPGVRQLD LPVGASKMSA DLHSLHWIMM
VICTVIFLAV FGVMFYSIIK HRKSKGHKPA NFHESVAVEI AWTIVPFVIV IGMGAMATKT
VVAQKDTTNA DLTIKATGYQ WKWGYDYLKG EGEGIAFLST LDTSHRAMSD SGKPEAIDNY
LLKVDNPLVV PVDKKIRIIT TADDVIHAFM VPQFGIKQDA IPGFVRDTWF RADKVGDFYG
QCAELCGKEH AYMPIHVKVL SAVDYSAWVD GEKKKLAALA DDPAKVWKLD ELVARGEKVY
AANCAACHQA NGKGAGPIKA VDGSPVVLDA DKTRQIAVLL NGQNNGAMPA WKQLSDTEIA
AVITYTKNNW SNKTGQIVQP ADVVAARK
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