| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3815 |
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| Symbol | |
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| ID | 6160622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4280091 |
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| End bp | 4280561 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666588 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001792834 |
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| Protein GI | 171060485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.221085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCA TCGTCCTGGT CCACCCCGAA ATCCCGCCCA ACACCGGCAA CGTGATCCGG
CTGGCCGCCA ACACCGGCTG CGAGCTGCAC CTGATCGAGC CGCTCGGTTT TTCGATGGAC
GACCGCCTGC TGCGCCGCGC CGGCCTCGAC TATCACGAGT ACGCGCCCGT GCGCCGCCAC
GCCGGCTGGG CCGCGTTCCT CGCCGACCAG CGGCCCGACC CGGCCACGCT CTACGCCTTC
ACCACCCGCG GCAGCCGGTC GCTGGCCGAG GTGGTCTGGC CGGCCGATGC CTGGCTGGTG
TTCGGTTGCG AGACCAGTGG CCTGCCCGAA GACGTGCGCG AGCAGATCGC CCCGGCACAG
CGCGTGCGGC TGCCGATGCG CGCCGGTCAG CGCAGCCTGA ACCTGAGCAA TGCGGTGGCG
GTGGCGGTGT TCGACGCCTG GCGCCAGCAG GGTTACGCCG GCGCTGTCTG A
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| Protein sequence | MFRIVLVHPE IPPNTGNVIR LAANTGCELH LIEPLGFSMD DRLLRRAGLD YHEYAPVRRH
AGWAAFLADQ RPDPATLYAF TTRGSRSLAE VVWPADAWLV FGCETSGLPE DVREQIAPAQ
RVRLPMRAGQ RSLNLSNAVA VAVFDAWRQQ GYAGAV
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