| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3809 |
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| Symbol | |
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| ID | 6160488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4274489 |
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| End bp | 4276087 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666582 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_001792828 |
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| Protein GI | 171060479 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.342298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CCTTCCTCGG CCGCCGCGGC ATCGCCGTGG CACCTCACAG CCTGGCCTCC
GAAGCCGCCT TGCGCGTGCT GCGCGAAGGC GGCAACGCGC TCGAAGCCAT GATCGCCGCC
GCGGCCTCGA TCGCGGTGGT CTACCCGCAC ATGAACTCGA TCGGCGGCGA CGGCTTCTGG
GTCATCAGCG GCCCGGGCGG CCAGCCGCAG GGCATCGACG CCAGTGGCGC CAGCGCGGCG
GCGGCCTCGA TCGACCGCTA CGCGCAGCGC GGCGTGCGCG GCAGCATCCC GTTTCGAGGC
GGCGTGGCGG CGCTGACGGT GGCCGGCACG GTGTCGGGCT GGGGCGCGGC GCATGCGCTG
TCGCAAGAGT GGGGCGGGCG CCTGCCGCTG TCGCGCCTGC TCGAAGACGC CACCTGGTAC
GCCCGCGAGG GCATTCCCGT CACGCACAGC CAGTGGGCCT GCACCACGGC CAAGCAGGCC
GAGCTGGCGC CGATCGCCGG TTTTGCCGAG ACCTTCCTGC CCGGCGGCGA GGTGCCCGCC
GCCGGCAGCC TGTTCAAGCT GCCGCGCCTG GCCGCCACGC TCGAACGCAT CGCCGCGCAC
GGCACGGATG ATTTCTACCG CGGTGACCTG GCGCGCCAGC TCGCCGCCGA ACTGGCCGCC
GTCGACAGCC CGCTGACGCT GGCCGACCTG CAGGCGCACC ACGCCAAGCG CGTCGACCCG
CTGGCGCTGC GCCTGCAGGG CCTGACGCTG ATGAACATGA CGCCGCCCTC GCAGGGCGTG
GTCTCGCTGA TGATCCTGGG CATCATGGCG CGCCTCAAGG GCTGGGACGC CGACCCGCTC
GGCCCGGCCT TCGTGCATGC ACAGGTCGAG GCCACCAAGC AGGCGTTTGC GCTGCGCGAC
CAGCACGTCA CCGACCCGGC CTTCATGAAG ATCGCACCCG CCGCGCTGCT GCGCGACGAG
CTGCTCGACG AGCTGGCCGG GCGCATCAGC CTGACGCAGG CCGCGCCCTT CGGCCGCAAG
ACCGACCCCG GCGACACCGT CTGGATGGGC GTGATCGACG GCCAGGGCCG CGCGGTCTCG
TTCATCCAGA GCATCTATCA CGAGTTCGGA TCGGGCATCG TGCTGCCGGG CTCGGGCGTC
AACTGGCAGA ACCGCGGCTG CAGCTTCAGC CTCGACCCCG CGCACATCAA CGCGCTGGCG
CCGCACAAGC GGCCGTTCCA CACCCTCAAC CCGGCGCTGG CGCAGCTCGA CGACGGCCGC
CTGATGGTCT ACGGCACGAT GGGCGGCGAC GGCCAGCCGC AGACGCAGGC CACGGTGTTC
AGCCGCATCC ACCGCTTCGG CCTGGCGCCG CAGGCGGCGA TCGAGCTGCC GCGCTGGCTG
CTCGGGCGCA CCTGGGGCAT GGCCAGCGAC AGCCTCAAGC TCGAATCACG CTTCCCGGCG
TCGACGGTGG CTGCGCTGCG CGCGCTGGGC CACGAGGTCG AGCTGCTGGC CGACTGGGAC
GAGTCGGTCG GCCACGCCGG TGCGCTGATC CGCGAGGCCA ACGGGCTGCT GGTGGGGGGC
TTCGACCCGC GCAGCAACGG CTCGGTGGCG GCGTACTGA
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| Protein sequence | MTQSFLGRRG IAVAPHSLAS EAALRVLREG GNALEAMIAA AASIAVVYPH MNSIGGDGFW
VISGPGGQPQ GIDASGASAA AASIDRYAQR GVRGSIPFRG GVAALTVAGT VSGWGAAHAL
SQEWGGRLPL SRLLEDATWY AREGIPVTHS QWACTTAKQA ELAPIAGFAE TFLPGGEVPA
AGSLFKLPRL AATLERIAAH GTDDFYRGDL ARQLAAELAA VDSPLTLADL QAHHAKRVDP
LALRLQGLTL MNMTPPSQGV VSLMILGIMA RLKGWDADPL GPAFVHAQVE ATKQAFALRD
QHVTDPAFMK IAPAALLRDE LLDELAGRIS LTQAAPFGRK TDPGDTVWMG VIDGQGRAVS
FIQSIYHEFG SGIVLPGSGV NWQNRGCSFS LDPAHINALA PHKRPFHTLN PALAQLDDGR
LMVYGTMGGD GQPQTQATVF SRIHRFGLAP QAAIELPRWL LGRTWGMASD SLKLESRFPA
STVAALRALG HEVELLADWD ESVGHAGALI REANGLLVGG FDPRSNGSVA AY
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