Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3801 |
Symbol | |
ID | 6160789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4266708 |
End bp | 4267760 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641666574 |
Product | chemotaxis-specific methylesterase |
Protein accession | YP_001792820 |
Protein GI | 171060471 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCA TCCAGGTGAT GGTGGTCGAC GACTCGGCCG TGGTGCGCCA GGTGGTGGCC GCCCTGCTGG CCGACGACCC CGAGATCGAG GTGCTGTGCG CGGTGGCCGA CCCGCTGCTG GCGATCAGCC GCATGCAGAC GCAGTGGCCC GACGTGATCG TGCTCGACAT CGAGATGCCG CGCATGGACG GCATCACCTT CCTCAAGAAG ATCATGGCCG AGCGGCCGAC GCCGGTGGTG ATCTGCTCGA CGCTGACCGA AGCCGGCACG CAGACCGCGC TGGCGGCGCT GGCCGCCGGC GCGGTGGCCA TCATCACCAA GCCCCGGCTC GGCCTCAAGC AGTTCCTGCA GGATGCATCC GACGACCTGC TGTCGGCGGT CAAGACCGCT GCGCGCGCCA ATGTGCGGCG GCTGAGCGTG TCGGCCAAGA ACACCGCCGA CGTCATCCTG CCGGCCGTCG AGCGCAGCAG CGCGATGCTG CAGACCACCG AGCGGGTGGT CGCGCTCGGC ACCTCGACAG GCGGCACGCA GGCGCTCGAA GTGGTGCTGC GCACGCTGCC ACGGGTCTGC CCGGGCATCG TGATCGTGCA GCACATGCCC GAGAAGTTCA CCGCCGCCTT CGCCGCGCGG CTCGACAGCG TCTGCCAGAT CGCCGTCAGG GAGGCGCAGA ACAACGACCG CGTGGTGCCC GGCCAGGCCC TGATCGCGCC GGGTGGCAAG CACATGCTGC TGCGCCGCAA CGGTGCGCAA TATCACGTCG AGGTGCTCGA CGGCCCGCTG GTGAATCGCC ACCGGCCGTC GGTCGACGTG CTGTTGCGCT CGGTCGCCAG GAGCGCCGGC GCCAACGCGC TGGGTGTCGT CATGACCGGC ATGGGCGACG ACGGCGCGGC CGGCCTGCTG GAGATGCGCA AGGCCGGCGC CCGCACGCTG GCGCAGGACG AGGCCAGCTG CGTGGTCTAC GGCATGCCCA AGGAGGCGGT CAAGCGCGGC GGCGTCGAGC GCTCGGTGCC GCTGGGCGCC ATCGGCCGCG AGATCATGCT GCAGCTGGCC TGA
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Protein sequence | MSRIQVMVVD DSAVVRQVVA ALLADDPEIE VLCAVADPLL AISRMQTQWP DVIVLDIEMP RMDGITFLKK IMAERPTPVV ICSTLTEAGT QTALAALAAG AVAIITKPRL GLKQFLQDAS DDLLSAVKTA ARANVRRLSV SAKNTADVIL PAVERSSAML QTTERVVALG TSTGGTQALE VVLRTLPRVC PGIVIVQHMP EKFTAAFAAR LDSVCQIAVR EAQNNDRVVP GQALIAPGGK HMLLRRNGAQ YHVEVLDGPL VNRHRPSVDV LLRSVARSAG ANALGVVMTG MGDDGAAGLL EMRKAGARTL AQDEASCVVY GMPKEAVKRG GVERSVPLGA IGREIMLQLA
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