| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3792 |
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| Symbol | |
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| ID | 6160719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4250210 |
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| End bp | 4252117 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666565 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792811 |
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| Protein GI | 171060462 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TGCTGGTCAG CGCGGCGATC GGCCTGCTGG GCTGGATCGG GGTGACGGCA
CCGGCCTGGT CGCAGGACCG GGCGCCGTCG CCGGTCGCGC CCGCGAGCGC ACGGGCTGCG
GACAGCGCCG ACGATGCCGC GCTGATCGCG CTGGGCCGGC GCGTCTACCG CGAGGGCCTC
GGCGTCGACG GCCAGCCGCT GGTGGCCGTG CGCGGCGGCG GCCTGCAGGC CAGCGGCGCG
GCCGTGGCCT GTGTCAACTG CCACCGCAGC AGCGGCCTCG GCGCGGTGGA GGGCAACATC
GCCGTCAGCC CGATCACCGG CCGCTACCTG TTCGGCCAGG ACGGTCGCGC CGTGGTCCAG
CAGAACATCC GCGGCGTCAA GGCCTTCAAC CAGCATCACG CACCGTATGA CGAGCACAGC
GTGGCCGCGG CGATCCGCGC CGGCGTGCAC GTCAGCGGCC GTGCGCTCGA TCCGCTGATG
CCGCGGTTCC AGATCGACGA CGCGTCGATG AAGGCGCTGC TCGCCTACCT GCGCCCGCTG
TCGTCGGGTG TGGCGCCGGG CGTGGCCGAC AAGCAGATCC GCCTGGCCAG CGTCGTCACG
CCCGATGTCG AGCCGGCGCG CCGCCAGCTC TTCATCGACA CCGTGACCGC CGCCGTGCGG
CAGAAGAACG GCAGCGTGGT GCACGGCCAG CGGGCGATGT CGAGCGCGGC CGAGATGCTG
CTGCGCACCG CGCGCAACTG GCAGCACGAG GTCTGGGAGC TGCACGGCCC CGAAGAAACC
TGGGCCGCGC AGCTGCAGGC GCACCAGGCG CGCGCGCCGG TGTTCGCGCT GGTGTCGGGC
CTGGGCGCCA GCCGCTGGGC GCCGGTGCAC CGCTTCTGCG AGCAGCAGGC GATGCCGTGC
TGGTTTCCGA GCGTGACGCA GCCGCCGGTC GAATCCGAGA CCGACAACTA TTCGGTCTAT
TTCTCGCGTG GCCTGTGGCT CGAGGCCGAC GTGCTGGCGC AGCGCTGGCA GCAGGCCGGC
GCTCAGGCAC CGCGGCGCGT GCTGCAGGTG CTGGGTGATG CGGCCGACGC GCCGGTGCTC
GACAGCGTCG AGGCCGCGAT GGCCGGCGGC TCGATGACGT TCGAGCGCGT GGCCTTCGAC
GCCGCGCGTG CACCGGCCCT GCTGCAGCGT CTGCGCGCGC TCGGTGCCCG CGACGCGGCC
GTGCTGTGGC TGCGCCCGGT GCAGGTCGAG GCGCTGGTGG CGGCGATGTC CGGCCCGGAG
CGCAGCCAGG TCCGTCACGA CGGCGCCGCG CTGGTCTGGT CGGGCCAGCT GCTGGCGGGC
CAGGCGCCCA ACCTGCCGCC GGCCTGGCTG GCGGCCAGCG AAGTGGTCTA TCCCTACCAG
CTGCCGGATC GGCGCGGCGG CAGCCTGAGC TATTTCCGCC AGTGGCTGCA GATCGCCCGC
CTGCCGCTGG CCGACGAGGT GCTGCAGTCG GAGGTCTATT TCGCGCTGGC CTTCCTGAGC
GACGTGCTGG TCGACATGCT CGACAACGTG CAGCGCGACT ACCTGCTCGA CCGCGCCGAG
TCGATGCTGA CGCTGCGCGA GACCGCGCGG GCCGAGGACG AGGCGCGCGA GCAGTCGACC
GTGGCCGTCA ACCGCGGACC GCGCGCCGGG CTGCGCGGCG TGCTGGTCGA ACGCAACGTC
GCCACCCGGC CGCTGCCGGG GCGGCGGCCG ATCGCCCAGC CGGCCGACAG CGTCGAGCCG
GCCTCCGAGC TGCCACGCAG CGAGGGCACC ACCGTCTATC CGCGCCTGAG CCTGGCACCC
GGCCAGCGCC ACGCCTCGCG GGGTGCCTAC GTGCTGCGCT ACCGCCCGGC CGCCGCACCC
GGCCAGGCGC CGCAGGCCGA GGCCCTGTCG GACTGGATCA CGCCGTGA
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| Protein sequence | MKKLLVSAAI GLLGWIGVTA PAWSQDRAPS PVAPASARAA DSADDAALIA LGRRVYREGL
GVDGQPLVAV RGGGLQASGA AVACVNCHRS SGLGAVEGNI AVSPITGRYL FGQDGRAVVQ
QNIRGVKAFN QHHAPYDEHS VAAAIRAGVH VSGRALDPLM PRFQIDDASM KALLAYLRPL
SSGVAPGVAD KQIRLASVVT PDVEPARRQL FIDTVTAAVR QKNGSVVHGQ RAMSSAAEML
LRTARNWQHE VWELHGPEET WAAQLQAHQA RAPVFALVSG LGASRWAPVH RFCEQQAMPC
WFPSVTQPPV ESETDNYSVY FSRGLWLEAD VLAQRWQQAG AQAPRRVLQV LGDAADAPVL
DSVEAAMAGG SMTFERVAFD AARAPALLQR LRALGARDAA VLWLRPVQVE ALVAAMSGPE
RSQVRHDGAA LVWSGQLLAG QAPNLPPAWL AASEVVYPYQ LPDRRGGSLS YFRQWLQIAR
LPLADEVLQS EVYFALAFLS DVLVDMLDNV QRDYLLDRAE SMLTLRETAR AEDEAREQST
VAVNRGPRAG LRGVLVERNV ATRPLPGRRP IAQPADSVEP ASELPRSEGT TVYPRLSLAP
GQRHASRGAY VLRYRPAAAP GQAPQAEALS DWITP
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