Gene Lcho_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3773 
Symbol 
ID6162283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4233386 
End bp4233817 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content69% 
IMG OID641666546 
Producthypothetical protein 
Protein accessionYP_001792792 
Protein GI171060443 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCGA TCGACCTCCT GCGCGCCACG CTGTGCGCGC TGATCCTCCT GGCGGCCCCG 
GCCAGCCGGG CCGAAGAAGC CGTGAAGGTG GTCTATCACC TCAGCGAAGG CCTGCCGCAG
GCCAGCCGCG CGCTCGGCAA CATCCGCAAC CACCTGGCGG CCGAACCGCA GACGAAGATC
GTGGTCGTCA CGCACGGGCC CGGCATCGAT TTCCTGCTCG ACGGCGCGGT CGACGCCAAG
GGCTCGGCCT ACTCGGCCGC GGTGGCCGAT CTGGTCGGCA AGGGCGTGGC GTTCAAGGTC
TGCAACAACA CCCTGACCGC GCGCCAGATC CCGAAAGAGA ACGTGATCAT GGAGGCCGGC
ATCGTGCCCT CCGGCGTGGC CGAGGTCGGC AAGCTGCAGG CCCGCGAGCA TTTCGTTTAC
CTGCGCCCCT GA
 
Protein sequence
MRSIDLLRAT LCALILLAAP ASRAEEAVKV VYHLSEGLPQ ASRALGNIRN HLAAEPQTKI 
VVVTHGPGID FLLDGAVDAK GSAYSAAVAD LVGKGVAFKV CNNTLTARQI PKENVIMEAG
IVPSGVAEVG KLQAREHFVY LRP