Gene Lcho_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3771 
Symbol 
ID6162281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4231603 
End bp4231980 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content69% 
IMG OID641666544 
Productputative cytochrome c 
Protein accessionYP_001792790 
Protein GI171060441 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTC GATCGACCGA CCAACCCAGT GCGCCGACAG CGCCGCGAGC ACCGCGTCGT 
GCACACCCCG TGCTGGCCCT GACGCTGACC GCGCTGATCG GCACGCTGTG CAGCGGCGCA
GCGGTCGCCA AGGATCCCGA GCGGCTGCGC CTGCGCGCGC TGGCCGCCAC CTGCGCCCAG
TGCCACGGCA CCGAAGGCCA GGCGGTCGAA GGCCAGGCGA TGGTGCGGCT GGCCGGTCTG
CCGGAGAACT ACATCCTGAC CCAGCTGATG GCGTTCCGCA GCGGCCAGCG GCCCGCGACG
ATCATGCATC AGATCACCAA GGGCTATTCG CCCGAGCAAC TCGAGTCGCT CGCGAAGTTC
TTCAGCAGCC ACAAGTGA
 
Protein sequence
MNRRSTDQPS APTAPRAPRR AHPVLALTLT ALIGTLCSGA AVAKDPERLR LRALAATCAQ 
CHGTEGQAVE GQAMVRLAGL PENYILTQLM AFRSGQRPAT IMHQITKGYS PEQLESLAKF
FSSHK