| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3765 |
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| Symbol | |
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| ID | 6162952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4224109 |
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| End bp | 4226358 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666538 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001792784 |
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| Protein GI | 171060435 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4548] Nitric oxide reductase activation protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.262699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCGGT CCGCCTTGCG CGAACGCCTC GACTGCCGCT TCGCTGCGGT CGACGACGTC
TTTGACGATT GCATCGACGA AGCGCTGCGT GTGCTCACGC CGCCCGGCTT CGACGCCTAC
CTCGAACAGG CCCGCCGGCT CGGCAAGCTC GGCCGCGGTG CCGAGCCGCT GCTGGTGTTT
CTGGAGGCCT GGCCGGCGGT CGCCAGCGTG GCTGGCGAGG CCACGCTCGA AGCCCTGGCG
CGTGCTGTCG ACGCCTTCCA GAAATCGCCC AACGGCCCGG CCATCGCCGC GCTGCTGCAG
AGCCTGCCTG CCGTCGCGCG CCGGCTGCGT TCGCCCGCGC TGATGGCGCA GTACCTGGCG
CTGGCGGTCG AGCTGATGCA GCGCACCAGC GTGTCGATCC ACGGCCGTCA CGCCACCGAA
CCGAGCCCGA GCCTGCCGAC GTTTCTGGCG CGTGCGCCGA TGCTGGTCGG CCAGGTGCCG
CTCGACGGCC TGCGGCGCTG GGTGCACGAG GGCATCCGCC TGCACGGCGC GCATCCGCAG
CGCCAGATCG ACCACTTCGC GCTCGCCACG CCCGACAGCC GCGCGCTGCT GCAACGCGAG
CGCCACGGCA CGCTGCTGGT CGACGTCGAG CGGCGCTTGG CGCTGACGCT GCGCGGGCTG
TGGGCGGCGC CGATGGCGCT GGTGCCCTAT CCGGTCGAGA CGGGGTTCGA GCCCGGCACG
CATGCAGTGA CGCAACCCTA CGCGCAGCCC GACGGCCTGC GCCTGCCCGA GGTGCTCGAT
GACCGCGCCG GCGTGCCGGC AATCGACCGC TACCGCGCCA TGCTCGCGCA CCTGGTCGGC
CATCAGCGCT GGAGCCAGCC GCAGGTGGCC GACAACCTGA GCCCGCTGCA GCGCCTGGCG
GTCGAGTGTT TCGAGGATGC GCGCATCGAC CACCTGGTGC TGCGCCGTTA TCCCGGCCTG
CGGCGCACGC TGCTGGCGTT GCACCCGCAG CCGGTCGAAG GGGCGTGTGA ACCGGCGCAC
GAGTCGTCTC TGCGCCACCG GCTGGCCTGT TTGTCGCGCG CCTTGCTCGA TGCCGATCAC
GGCTACCGCG AGCCGGCCTT GCGCGACTTC CACGCGCGTT TTCACGCGGC CTTGCACGAG
CGCGAATCCT CGACCGCCGA GATGGCCATG CTGGCGCTCG AATGGGCCGC GGCCACGCGC
CGCCAGAGCG ACCAGCTCGC CCGCGTCAAC TTCACCGACA CCCAGGTCGA TTGGCGCGAC
GACAACCGCG GGCTGTGGCG CTACATCGAA GCCGGCGACG AAGAAGAGTC GTTCGATCAA
ACCCGCCGCA AGCCCGCGCC GCCGGCGGAT GCGGCGCTGC CGCCGCATCA CTATCCCGAG
TGGGACGAGG CGATCCGCAG CCATCGGCCC GACTGGACGA GCGTCTACGA CACGCTGCAA
CCCGCCGGCG ATCCGGCCGA CATCGACGCG CTGCTCGCCC GCCACGCCCC GGTCGCGCGT
CACCTCCAGC GCCTGCTCGA CCTGCTCAAG CCGCAGGACC GCACCCGGCT GCGCCATCAG
GAGGAGGGCA GCGAACTCGA CCTCGACGCC GCCCTGCGCG CGCTGACCGA CTGGCGCGCC
GGTGCCGAGC CCGACTCGCG GTTCCAGATG AGCACCCGCA CCGACGGGCG CGACATCGCG
GTGCTGTTGC TGATCGACCT GTCGGCGTCG GTCAACGATG CGGTGCCGGG CAGCGACGAA
ACGGTGCTGT CGCTCAGCCG CGCCGCGGTG GCGCTGCTGG CCGGCGCGAT CGCAGCGCTG
GGCGATCAGC TCGCGATCGC GGGTTTCCAC TCCAACACCC GCCACGAAGT GCGTTACCTG
CACATCAAGG GTTTTGCCGA GCCGTGGTCG GATGCACCCA AGGCCCGCCT CGCCGGTGCC
GAGGGCGCCT ATTCCACCCG CATGGGCGCG GCGCTGCGCC ACGCCGGCCA CCTGCTGTCG
GGCCGTCAGG CACACAAGCG CCTGCTGCTG GTGCTGACCG ACGGCCAGCC CGCCGACATC
GATGTCAACG ACCCGCAGCA CCTGATCGCC GACGCCGCCC AGGCGGTGCG CGAGCTCGAT
CGCGACGGCG TCTACGCCCA CTGCATCAGC CTCGACCCGA AGGCCGACAC CTACGTCGGG
CGCATCTTCG GCCGCCGCTT CACGGTGATC GACCGGGTCG AACAACTGCC GCGGCGCTTG
CCGGAGGTGT TTCTGGGGCT CACCCGTTGA
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| Protein sequence | MNRSALRERL DCRFAAVDDV FDDCIDEALR VLTPPGFDAY LEQARRLGKL GRGAEPLLVF
LEAWPAVASV AGEATLEALA RAVDAFQKSP NGPAIAALLQ SLPAVARRLR SPALMAQYLA
LAVELMQRTS VSIHGRHATE PSPSLPTFLA RAPMLVGQVP LDGLRRWVHE GIRLHGAHPQ
RQIDHFALAT PDSRALLQRE RHGTLLVDVE RRLALTLRGL WAAPMALVPY PVETGFEPGT
HAVTQPYAQP DGLRLPEVLD DRAGVPAIDR YRAMLAHLVG HQRWSQPQVA DNLSPLQRLA
VECFEDARID HLVLRRYPGL RRTLLALHPQ PVEGACEPAH ESSLRHRLAC LSRALLDADH
GYREPALRDF HARFHAALHE RESSTAEMAM LALEWAAATR RQSDQLARVN FTDTQVDWRD
DNRGLWRYIE AGDEEESFDQ TRRKPAPPAD AALPPHHYPE WDEAIRSHRP DWTSVYDTLQ
PAGDPADIDA LLARHAPVAR HLQRLLDLLK PQDRTRLRHQ EEGSELDLDA ALRALTDWRA
GAEPDSRFQM STRTDGRDIA VLLLIDLSAS VNDAVPGSDE TVLSLSRAAV ALLAGAIAAL
GDQLAIAGFH SNTRHEVRYL HIKGFAEPWS DAPKARLAGA EGAYSTRMGA ALRHAGHLLS
GRQAHKRLLL VLTDGQPADI DVNDPQHLIA DAAQAVRELD RDGVYAHCIS LDPKADTYVG
RIFGRRFTVI DRVEQLPRRL PEVFLGLTR
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