Gene Lcho_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3742 
Symbol 
ID6163827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4199409 
End bp4200479 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content68% 
IMG OID641666515 
Productadenosine deaminase 
Protein accessionYP_001792761 
Protein GI171060412 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCT ACGCCCCGTC CGAATCCGTG GCCCGAGCCC TCGACGCCCT GCCACGCGAG 
CGCCTGCCGG CGCTGCTGCG CCTGATGCCC AAGGCCGAGC TGCACATCCA CATCGAAGGC
TCGCTGGAAC CCGAGCTGAT CTTCAAGCTC GCGCAGCGCA ACGGCGTGAC GCTGCCGTAT
GCGAGCGTCG AGGCGCTGCG CGCGGCCTAC GCCTTCACCG ATCTGCAGAG CTTTCTCGAC
ATCTACTACG CCGGCGCCAG CGTGCTGCTG AAGGAGGCCG ATTTCTTCGA GATGGCCTGG
GCCTACCTGG AGCGCGCCGC GGCCGACAAC GTCGTGCACG CCGAGATCTT CTTCGACCCG
CAGACCCACA CCGAGCGCGG CGTGCCGTTC GAGACCGTCA TCCTCGGCCT CGACCACGCG
GTGCACCGCG CCCACACCGA GCTGGGCGTG AGCGCCAGGC TGATCCTGTG TTTCCTGCGC
CACCTGAGCG AAGAAGATGC CTTCAAGACG CTCGAAGCTG CCTTGCCGTG GCGCCACCAC
TTCATCGGCG TCGGGCTCGA CAGCAGCGAG ATGGGCTTTC CTCCGGCCAA GTTCGAGCGC
GTGTTTGCAC GCGCCCGCGA ACTCGGTTTC CACATCGTCG CCCACGCCGG CGAAGAAGGC
CCGCCGGCCT ACATCACCGA GGCGCTCGAC CTGCTGCACA CCGAGCGCAT CGACCACGGC
GTGCGCTGCC TCGAAGACGC AGGCCTGGTG GCGCGGCTGG CCGCGAGCCG CATGCCGCTG
ACGGTCTGCC CGCTGTCGAA CCTCAAGCTG TGCGTCTTCA AGACCCTGGC CGAGCACAAC
CTGCCTGCGC TGCTCGATGT CGGCCTGTGC GCGATGGTCA ATTCGGACGA CCCGGCCTAC
TTCGGCGGGT ATCTGAACCA GAACTTCGTC GAGACCTTCG CCGCGCTGCC GCAGCTGGGT
GCGCGGCAGG CCTGGCAGCT GGCCGCCAAC AGCTTCGAGG CGAGTTTCGT CAGTGACGAG
CAGAAGGCGC ATTGGCTGCA CCAGCTTGAG GTGGCGGTGC TGTCCGCCTG A
 
Protein sequence
MSPYAPSESV ARALDALPRE RLPALLRLMP KAELHIHIEG SLEPELIFKL AQRNGVTLPY 
ASVEALRAAY AFTDLQSFLD IYYAGASVLL KEADFFEMAW AYLERAAADN VVHAEIFFDP
QTHTERGVPF ETVILGLDHA VHRAHTELGV SARLILCFLR HLSEEDAFKT LEAALPWRHH
FIGVGLDSSE MGFPPAKFER VFARARELGF HIVAHAGEEG PPAYITEALD LLHTERIDHG
VRCLEDAGLV ARLAASRMPL TVCPLSNLKL CVFKTLAEHN LPALLDVGLC AMVNSDDPAY
FGGYLNQNFV ETFAALPQLG ARQAWQLAAN SFEASFVSDE QKAHWLHQLE VAVLSA