| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3738 |
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| Symbol | |
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| ID | 6163823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4182230 |
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| End bp | 4183027 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666511 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_001792757 |
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| Protein GI | 171060408 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC TCTCCCGAAT CGCCGCGCTG GTCGGCGCCA GCCTGCTGGC CGGCCACACG
CTGGCGCAAG CCCAGGTGCA GCGCACCAAC CTGCCCGCCG CGCCAGCGGG CGCCATCAGC
CTGCCGGCCG CCCCCGAGCC CGAGCTGCGC GCCCAGCTCA CGCCGCGCCG CTACACCACG
CTGGCGGCCG AGATCGGCGC GCGCATCGAG CACCTGGCGG TGACCGAAGG CGGCGTGATC
CGCGCCGGCG AGGTGCTGCT GCGCTTCGAC TGCAGCCTGC AGAAGGCCCA GCTCGACCGC
GCCCGCGCCA GCCTCGGCGC GGCCGAGAAA CAGCTCGCCA CCCAGCGCCG CCTGGTCGAG
CTCAACGCCA CCGGCCGGCA GGAGGTCGAC ATGGCCGAGG CCGAGGTCGC CAAGACCCGC
GCCGAAGCGG CGCAGATCGA CGTCCAGCTC GGCAAGTGCA CGGTGGTCGC GCCGTTCAGC
GGCCGGGTGG CCGAGCAGAA GGTGCGCGAG CAGCAGTACG TGCAGCCCGG CCAGGCGCTG
CTCGAAGTGC TCGACGACAG CGTGCTCGAA GTCGAATTCA TCATGCCCTC GCGCTGGCTG
CAGAGCGTGC GCGTGGGCAG CACGGTGCAG ATCGCGGTCG ACGAGACCGG CCGCAGCTAC
CCGGCCAAGG TGCAGCGCCT GGGCGCCCGG GTCGATCCGG TCAGCCAGTC GGTCAAGGTC
ATCGCCGCCA TCGAAGGCCG CCGCGCCGAG CTGATGGCCG GCATGAGCGG GCGGGTGCTG
GTCAAGCGCG GCCCGTGA
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| Protein sequence | MNTLSRIAAL VGASLLAGHT LAQAQVQRTN LPAAPAGAIS LPAAPEPELR AQLTPRRYTT
LAAEIGARIE HLAVTEGGVI RAGEVLLRFD CSLQKAQLDR ARASLGAAEK QLATQRRLVE
LNATGRQEVD MAEAEVAKTR AEAAQIDVQL GKCTVVAPFS GRVAEQKVRE QQYVQPGQAL
LEVLDDSVLE VEFIMPSRWL QSVRVGSTVQ IAVDETGRSY PAKVQRLGAR VDPVSQSVKV
IAAIEGRRAE LMAGMSGRVL VKRGP
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