| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3737 |
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| Symbol | |
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| ID | 6163822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4180690 |
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| End bp | 4182180 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666510 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001792756 |
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| Protein GI | 171060407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGCGCA CTGCCCCTCA TCGCCTGCTC ACCCTGGTCG CCCCGGCGAC GTTGGCCCTG
CTCACCGCCT GCGCCCAGTT GCCGCCGCAG GCGCTCCAGG CCGATGAACA CCAGGCCCAG
ACCCGCGCCG ACAGCGAAGC GGCGCGCCGC GACGTGCCGC CGCTGGGCGC CCAGCTCGGC
CTCGACGAGG CGATCGCCCG GGCCCTGAAA TACAACCTCG ACCGCCGCGC CCGCCTGATG
GAGCAGGCCA TGGCGCTGCA GCAGTACGAC GCCAGCGCCT ACGACAGCCT GCCCAAGCTG
GTGGCCTCGG CCGGCTATTC GGCGCGTGAC AGCGATCGGC TGGCGCGCAG CGTCAACGCC
GCCACCGGCC AGCAGATCGG CGTCGATCCG TCGATCTCGC AGGAGCGCCA GCACACGCTG
GTGCAGTTGG ACATGACCTG GAGCCTGCTC GACTTCGGCC TGGCCAAGTA CAACAGTCAG
CAAGCTGGCG ACCGCGTGCT GGCCGCCGCC GAGCGTCGCC GCAAGGCCAC CCACCTGCTG
GTGCAGGACG TGCGCGTGGC CTACTGGCGC GCCGCCAGCG CCCAGCGCCT GCACGGCGAG
GTGCGCGCCG CACTCGCGCT GGCCGACGAG GCGATGGTCG ACGCCCGCCG CGCCGAAGAA
GAAAAGCTGC GCGCCCCGCT CGACTCGCTG CGCTACCAGC GTCAGCTGAC CGAGAACATG
CGCCTGCTCG AATCGATCGA ACAGGAACTG GTGACCGCCC GCTACGACCT GGCCGGCCTG
ATCAACGCAC CGGTGATGAT GCAGGTCGAG TTCGACAGCG ACAGCAAGCT CGGCCAGACC
GACCTGCTCG CCACTTCGGC CGAGGCGATG GAAGAACAGG CCCTGGCGCA GAACGCCGAC
CTGCGCGAGC AGGCCTACCA GCGCCGCATT GCCGCCACCG AGGTGCACAA GGTGCTGGCG
CGCATCTATC CCAATCTGAG CTTCAACCTC GGCGCCCGCT ACGACACCGA CAGCTACCTG
GTCAACAAGA GCTGGAACGA GGCCGGCATG CAGGTCTCGT ACAACCTGTG GAACCTGCTG
TCGGTGCCAG CCCAGAAGCT GGCCGCCGAG GCCGGCGTGG CGCTGGCCGA CCAGCGCCGC
CTGGCCGCCC ACGTGGCGGT GGTGACGCAG GTGCACGTGG CACGCGAGCA GCTGGCCAGT
GCGCGCCTGC AGCTCAAGCG GGCCGACGCG CTGTGGACGC TCGACAGCAA GATCATGGAG
CAGCTGATGC GCCGCGAGCA GGCCCAGGCC GGCTCCAAGC TCGAGCGCGT GGCCGCGCAG
ACCACCACCA TCGTCAGCCT GCTGCGCCGC TACCAGGCGC TGGCCCAGGC CCACGCCGCC
ACCAGCCGCC TGCAGGCCAC GCTGGGCATC GACCCGCTGC CCGACAGCAG CGACGACCTG
AGCCTGGCGC AGATCCGCGA GCAGGTGCGC AGCCGCCTGC TCGGCAGCTG A
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| Protein sequence | MPRTAPHRLL TLVAPATLAL LTACAQLPPQ ALQADEHQAQ TRADSEAARR DVPPLGAQLG
LDEAIARALK YNLDRRARLM EQAMALQQYD ASAYDSLPKL VASAGYSARD SDRLARSVNA
ATGQQIGVDP SISQERQHTL VQLDMTWSLL DFGLAKYNSQ QAGDRVLAAA ERRRKATHLL
VQDVRVAYWR AASAQRLHGE VRAALALADE AMVDARRAEE EKLRAPLDSL RYQRQLTENM
RLLESIEQEL VTARYDLAGL INAPVMMQVE FDSDSKLGQT DLLATSAEAM EEQALAQNAD
LREQAYQRRI AATEVHKVLA RIYPNLSFNL GARYDTDSYL VNKSWNEAGM QVSYNLWNLL
SVPAQKLAAE AGVALADQRR LAAHVAVVTQ VHVAREQLAS ARLQLKRADA LWTLDSKIME
QLMRREQAQA GSKLERVAAQ TTTIVSLLRR YQALAQAHAA TSRLQATLGI DPLPDSSDDL
SLAQIREQVR SRLLGS
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