| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3728 |
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| Symbol | |
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| ID | 6162537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4168928 |
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| End bp | 4171912 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666501 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001792747 |
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| Protein GI | 171060398 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.262187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGA CCCGCAAAGC CGGCTCCCCC GGCACGCCCG GCGCCCAGGC TTCGAGCCTG
GTCGCCAATC TCTCCCGAGG CCTGGCCCGC GCCGTGCCGA CGATGGATCG CCGCAGCTTC
CTGCGCCGCT CCGGCCTTGG CGTGGGGGCC GGCATTGCGG CCTCTCAATT GACGCTGGTC
AAGAAGGTGG ACGCGGCAGA AACCGCAGCG GCCGCGACGG GTGGCGGCAA GAAGATCGAA
GTCAAACGCA CGGTCTGCGG CCATTGCTCG GTCGGCTGTG CAATCGACGC GGTGGTCGAG
AACGGCGTGT GGGTGCGCCA GGAGCCGGTG TTCGATTCGC CCATCAACCT CGGTGCCCAT
TGCGCCAAGG GCGCGGCGGT GCGCGAAAAC GGCCACGGCG AGTTCCGTCT CAAGTACCCG
ATGAAGCTGG TCAACGGCAA GTACCAGCGC ATCTCGTGGG ACGTGGCGCT CGACGAGATC
AGCCAGAAGA TGCTCGCGCT ACGCAAGGAG AGCGGGCCCG ACGCGCTGTT CTTCGTCGGC
TCGTCCAAGC ACAACAACGA GCAGGCCTAT CTGATGCGCA AATGGGTGTC GTACTGGGGC
ACCAACAACA CCGACCATCA GGCGCGCATC TGCCACTCCA CCACGGTGGC CGGCGTGGCC
AACACGTGGG GGTATGGCGC GATGACCAAC TCCTACAACG ACATGCAGAA CGCCCGCGCC
GCGCTCTACA TCGGCAGCAA TGCGGCCGAG GCGCATCCGG TGTCGATGCT GCACGTGCTG
CACGCCAAGG AGAACGGCTG CAAGATGATC GTGGTCGACC CGCGCTTCAC GCGCACGGCG
GCCAAGGCCG ATCAGTACGT GCGCATCCGC TCGGGCTCGG ACATCCCCTT CCTGTTCGGC
GTGCTGCACC ACATCTTCAA GAACGGCTGG GAAGACAAGA AGTACCTCGA AGATCGCGTC
TACGGCATGG AGAAGGTGCG CGAGGACGTG CTGGCCAAGT GGACACCCGA CAAGGTGCTC
GAAGCCTGCG GCGTCGACGA AGCCACCTGC CTGCAGGTGG CGCGCACGAT GGCCGAGAAC
CGGCCGAGCA CGATCGTCTG GTGCATGGGC CAGACCCAGC ACACGATCGG CAATGCGATG
GTGCGCGCGT CGTGCATCCT GCAGCTCGCA TTGGGCAATG TGGGAAAAAG CGGCGGCGGC
ACCAACATCT TCCGCGGCCA CGACAACGTG CAGGGCGCCA CCGACGTCGG CCCCAATCCC
GATTCATTGC CCGGCTATTA CGGCCTGGCC GAAGGCTCGT GGAAACACTT CGCCAAGGTC
TGGGGCACCG ACTTCGAATG GATCAAGAAG CAGTACGCGC CCGGCATGAT GACCAAGCCC
GGCATGACGG TGTCGCGCTG GGTCGACGGC GTGCTCGAGA AGAACGAGCT GATCGATCAG
GACAGCAATC TGCGCGGCCT GTTCTTCTGG GGCCACGCAC CGAACTCGCA GACCCGCGGC
CTGGAGATGA AACGAGCGAT GGACAAGCTC GACCTGCTGG TGGTGGTCGA CCCGTTCCCG
AGTGCGACCG CGGCCATGGC CGCGATGCCC GGCAAGCCCG AAGACCAGAA CGCCAACCGC
GCGGTCTACC TGCTGCCGGC GACGACGCAG TTCGAGACCA GCGGTTCGTG CACCGCCTCG
AACCGCTCGA TCCAATGGCG CGAGAAGGTC ATCGAGCCGC TGTGGGAAAG CCGCACCGAC
CACATGATCA TGTACCAGCT GGCCGACAAG CTCGGCTTCG GCGCGGAGCT GGTCAAGAAC
TACAAGATGG TCGACGGCAA GGGCGGCAAG GAGCCCGAGA CCGAGTCGAT CCTTCGCGAG
ATCAACCGCA GCGTCTGGAC CATCGGCTAC ACCGGCCAGA GCCCCGAGCG GCTGAAGGCC
CACATGCGCA ACATGCACGT GTTCGACGTG CGCACGCTCA AGGCCAAGGG CGGCATCGAC
AAGGAAACCG GCTACTCGCT CGATGGCGAC TACTTCGGCC TACCCTGGCC GTCCTACGGC
ACGCCGGAGA TGAAGCACCC GGGTTCGCCC AACCTCTACG ACACCTCCAA GCACGTGATG
GATGGCGGCG GGAACTTCCG CGCCAATTTC GGCGTCGAGC GCGACGGTGT CTCGCTGCTG
GCCGGTGACG GCTCGCATTC TCTGGGTGCC GATCTCACCA CCGGCTATCC CGAGTTCGAC
CACCTGCTGC TGAAGAAACT CGGCTGGTGG GACGACCTGA CCGACGCCGA GAAGACCGCC
GCAGAAGGCA AGAACTGGAA GACCGACCCG TCGGGCGGCA TCATCCGCGT GGCGATGAAG
GTGCACGGCT GCCACCCCTT CGGCAATGCC AAGGCGCGCG CGGTGGTGTG GAACTTCCCC
GATCCGATTC CGCAGCACCG TGAGCCGCTC TACAGCACCC GCCCGGAACT GGTCGACAAG
TACCCGACCC ACGACGACAA GAAGGCCTTC TGGCGCCTGC CCACGCTTTA CAAGAGCGTG
CAGCAGAAGA ACCGCGACAT CGGAAAGACC TTTCCGCTGA TCATGACCAG CGGACGCCTG
GTCGAGTTCG AGGGCGGCGG CGAGGAGACA CGCTCCAACC CGTGGCTGGC GGAGTTGCAG
CAGGACATGT TTGTCGAGAT CAACCCGAAG GCGGCCAATG ACCGTGGCAT CCGCAACGGC
GACTACGTCT GGGTGAAGAC CCCGCCGATG GCCGCAATGC CCGAGTTCAA GGGCCTGCGC
GTCAAGGCGC TCGTCACCGA GCGGGTCGAT TCGGAGACGG TGTTCCTGCC CTTCCACTTC
TCGGGCCGCT GGGGTGGTGT GGACCTGGCG CCGTATTACC CGGAAGGCGC GTACCCGGTG
GTGCGCGGCG AGTCGGTCAA TGTCGCCACG ACCTACGGCT ACGACAGCGT GACGATGATG
CAGGAGACCA AGACGACTCT CTGCCAGATC GAAAAAGTGG CATGA
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| Protein sequence | MLLTRKAGSP GTPGAQASSL VANLSRGLAR AVPTMDRRSF LRRSGLGVGA GIAASQLTLV
KKVDAAETAA AATGGGKKIE VKRTVCGHCS VGCAIDAVVE NGVWVRQEPV FDSPINLGAH
CAKGAAVREN GHGEFRLKYP MKLVNGKYQR ISWDVALDEI SQKMLALRKE SGPDALFFVG
SSKHNNEQAY LMRKWVSYWG TNNTDHQARI CHSTTVAGVA NTWGYGAMTN SYNDMQNARA
ALYIGSNAAE AHPVSMLHVL HAKENGCKMI VVDPRFTRTA AKADQYVRIR SGSDIPFLFG
VLHHIFKNGW EDKKYLEDRV YGMEKVREDV LAKWTPDKVL EACGVDEATC LQVARTMAEN
RPSTIVWCMG QTQHTIGNAM VRASCILQLA LGNVGKSGGG TNIFRGHDNV QGATDVGPNP
DSLPGYYGLA EGSWKHFAKV WGTDFEWIKK QYAPGMMTKP GMTVSRWVDG VLEKNELIDQ
DSNLRGLFFW GHAPNSQTRG LEMKRAMDKL DLLVVVDPFP SATAAMAAMP GKPEDQNANR
AVYLLPATTQ FETSGSCTAS NRSIQWREKV IEPLWESRTD HMIMYQLADK LGFGAELVKN
YKMVDGKGGK EPETESILRE INRSVWTIGY TGQSPERLKA HMRNMHVFDV RTLKAKGGID
KETGYSLDGD YFGLPWPSYG TPEMKHPGSP NLYDTSKHVM DGGGNFRANF GVERDGVSLL
AGDGSHSLGA DLTTGYPEFD HLLLKKLGWW DDLTDAEKTA AEGKNWKTDP SGGIIRVAMK
VHGCHPFGNA KARAVVWNFP DPIPQHREPL YSTRPELVDK YPTHDDKKAF WRLPTLYKSV
QQKNRDIGKT FPLIMTSGRL VEFEGGGEET RSNPWLAELQ QDMFVEINPK AANDRGIRNG
DYVWVKTPPM AAMPEFKGLR VKALVTERVD SETVFLPFHF SGRWGGVDLA PYYPEGAYPV
VRGESVNVAT TYGYDSVTMM QETKTTLCQI EKVA
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