| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3725 |
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| Symbol | |
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| ID | 6162534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4166764 |
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| End bp | 4167918 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666498 |
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| Product | formate dehydrogenase, gamma subunit |
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| Protein accession | YP_001792744 |
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| Protein GI | 171060395 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.455366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACA TCCTTCGGCA CCTGACGCGC AGTGTGGTTC TTGCCGTGCT GCTGGCAGGC
GGCCTGGCCG CTCCGGTGCT GGCCCAGCAG GCTGTGTCGG CGGGCGCTTC GGCGCCGGCC
GGTTTCGTGG TCCAGGCCGA ACCGAAGCCC GACGAGACCA ATGCCCAGCG CGCCCAGACC
CAGCCCGGCA ACAACGCGCC GTTCTGGCGC TCGGTGCGCG AGTCCGGCGA GCAGGCGGGT
TATTCGAGTC TGCCGGGCGT CGAGCGCGGC ACGCTGATCC AGTCCTTCGT GCAGTACCCC
GGCTCGCGCT ACGCCACCGC GGGCGAAGCC TGGCGGCAGG TGCGCAACAA CTGGATCATT
CCGTACGGCG GCGCGCTGCT GCTGATCGTG GCGGTGGCGA TCGCGATCTT CTACTGGCGC
GTCGGCGCAC TCGGCGGTCA CATCCCCGAC ACCGGCCGCA AGGTCGAGCG CTTCACGCCG
TTCGAGCGCG CCGCGCACGG GGTCAACGCG GTGGCGTTCA CGGTGCTGGC GATCTCGGGC
ATCGTGATGG CGTTCGGCAA GTTCTTCCTG CTGCCGATCC TGGGCGGGCT GGTGTTCGGC
TGGCTGACCT ATGTGCTCAA GACCTTGCAC AACTTCGCCG GCCCGCTGTT CGCGGTGTCG
CTGCTGGTGG TGATCGTGAC CTTCGTGCGC GACAACCTGC CGCGCAAGGG TGATCTGAAC
TGGATGCTGC GCATGGGCGG CCTGTTCGGC GATCACGAGG TGCCGTCGCA CCGCTTCAAC
GCCGGCGAGA AGCTGGTGTT CTGGGGTGGC GTGTTCGCGC TGGGCCTGAT CGTCGTGGCA
TCGGGCCTGG TGCTCGACCA GCTGGTGCCC TCGCTCGACT ACACCCGTGG CCAGATGCAG
ATCGCGCACA TGGTGCACGG CGTGGCCACC GCGCTGATGA TGGCGATGTT CATCGGCCAC
ATCTACATGG GCACGATCGG CACCCGGGGT GCGCTCGACG GCATGCGCAC CGGCCAGGTC
GACGAGGCCT GGGCGCAGGA GCACCACGAG CTCTGGTACG ACGACATCAA GGCCGGGCGC
ATCCCGGCGC AGCGCTCCGG TGGCGCGGCC CCGGCATCGG CCCCGACGGG TGGTGCGGCC
GGCGCGCACA CCTGA
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| Protein sequence | MQDILRHLTR SVVLAVLLAG GLAAPVLAQQ AVSAGASAPA GFVVQAEPKP DETNAQRAQT
QPGNNAPFWR SVRESGEQAG YSSLPGVERG TLIQSFVQYP GSRYATAGEA WRQVRNNWII
PYGGALLLIV AVAIAIFYWR VGALGGHIPD TGRKVERFTP FERAAHGVNA VAFTVLAISG
IVMAFGKFFL LPILGGLVFG WLTYVLKTLH NFAGPLFAVS LLVVIVTFVR DNLPRKGDLN
WMLRMGGLFG DHEVPSHRFN AGEKLVFWGG VFALGLIVVA SGLVLDQLVP SLDYTRGQMQ
IAHMVHGVAT ALMMAMFIGH IYMGTIGTRG ALDGMRTGQV DEAWAQEHHE LWYDDIKAGR
IPAQRSGGAA PASAPTGGAA GAHT
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