| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3719 |
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| Symbol | |
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| ID | 6161730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4160015 |
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| End bp | 4162117 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666492 |
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| Product | elongation factor G |
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| Protein accession | YP_001792738 |
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| Protein GI | 171060389 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.252538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGCC TAGCCCCGAG CAGCGCCGTT GCCGCGCCCA GCGACGCTGC GTCCTCCCCC
CGACCGATCC CGATCCGAAC GCTCGCACTG GTGGGGCCGG CCGCCGCGGG CAAGACCAGT
CTGGTCGAGG CGCTGCTGCA GCAGGCCGGC GTGATCGGCG CAGCCGGCAG CGTCGAGCGC
GGTGGCACGG TGAGCGATTT CGATGCCATC GAGCGCCGCA TGCAGCACTC GCTGACGACC
AGCGTGATGC ACCTGCAGCA CCACGACACC CGCATCCACC TGCTCGACAC CCCCGGCAGC
GCCGACTTTC TCGGCCAGTC GCTGCCCGCG CTGGAGGCGG TCGAAACCGC CGCGATCGTG
ATCAACGCGA CCACCGGCGT CGAGCCGATG GCGCTGCGCA TGATGGCCTA CGCCGCCGAG
CGTGCGCTCG ACCGCATCGT CATCGTCAAC CGCATCGACG CCCCCGGGGT CAAGCTGGCC
GATGTGCTGG CGCAGATCCA GGCCGCCTTC GGGCGCGAGT GCCTGCCGCT GAACCTGCCG
GCCGCGGGCG GGCGCGAGGT GGTCGACTGC TGGTTCGCAC CCGAGGCACA GCCGGGCCAC
GAGGCCGATT TCTCGTCGGT GGCCGCCGCG CACCGGGCGC TGGTGGAGCA GGTGGTCGAG
GTCGACGGCG ATTTCGTCGA GCGCTATCTC AACGACGGCG ACGTGGCCAC CAGCGAGCTG
CATGCGCCGC TGGAGCAGGC GCTGCGCGAG GGGCACCTGA TCCCGGTGCT GTTCGTCTCG
GCCAGGACCG GCGCCGGCGT GGCGCAGCTG CTGGACGTGA TCGAACAGCT GCTGCCCGAT
CCGAGCGAGG GCAACCTGCC CGATTTCTAC CAGGGCGAGG GCGACGCCGC CCGCTTGATG
CACGCGGCGG TCGACCCCGC GCAGCACGTG CTGGCGCATG TGTTCAAGGT GGCGATCGAT
CCCTACGTGG GCAAGATGGG GATCTTCCGC GTGCACCAGG GCACCGTCAC CGCCAACAGC
CAGCTGTACG TGGGCGACGG CCGCAAGCCG TTCAAGGTCG GCCACCTGTT CATGCTGCAG
GGCAAGGACC ACGTGGAGGT CAGCCGGGCG CTGCCGGGGG ACATCGTGGC GGTGGCCAAG
GTCGACGAGA TCGCCTACGA CGCGGTGCTG CACGACGCCG CCGAGGACGA CCACATCCAC
CTCAAGCCCC TGAACTTTCC GCTGCCGGTG CACGGCCTGG CGCTCAAGCC CAGGCGGCAT
GGCGACGAGC AGCGGCTGGC CGAGGTGCTC GCCAAGCTGG CCGCCGAAGA CCCCTGCCTG
CGGGTCGAGC AGGTGGCGAG CACGCAGGAG ACCGTCGTCT ACGGCCTGGG CGAGCTGCAC
CTGCGCGTGC TGCTGGAGCG CCTGCGCGAG AACTACCGCG TCGAGGTCGA CACCGCGCCG
CCGCGCATCG CCTACCGCGA GACCATCACC ACCTCGGCAC AGGCGCAGTA CCGCCACAAG
AAGCAGAGCG GCGGCGCCGG CCAGTTCGGC GAGGTGCACC TGCAGGTCGA GCCGCTGCCA
CGCGGCGCGG GCTTCGAGTT CGTCGACGTG GTCAAGGGCG GCGCGATCCC CGGCCAGTAC
ATCCCGGCGG TCGAAAAAGG CGTGCGGCTG GCGATGGACG CGGGCGTGAT CGCCGGCCAC
CCGGTCGTCG ACGTGCGGGT GACGGTGGTC GACGGCAAGC ACCACAGCGT CGACAGCAAG
GAGATCGCCT TCGTCACCGC CGGCAAGAAG GCCTTCATCG CGGCGATGCG CGAGGCCCAG
CCGATCGTGC TGGAGCCGGT GGTGGACGTG GAGATCACCG CCACCGACGA CCACATCGGC
GACATCACCG GCGATCTGGC CTCGCGCCGC GGCGAGGTGC GCGGCACCGA CCGCATGGCT
TCGGGGCTGG CCAGCGTGCG CGCGCGCGCG CCGCTGTCGG AACTGTCGGG CTACCAGCTG
CGGCTCAATG CGCTGACCCG CGGCGAGGGC CGCTACACGC TGGCGATGTC GCACTACGAC
GCGGTGCCGC CGAACGTGCA GGCCGAGATG GTCAAGGGCT ATCAGCTGCG CGACGAGGAC
TGA
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| Protein sequence | MSSLAPSSAV AAPSDAASSP RPIPIRTLAL VGPAAAGKTS LVEALLQQAG VIGAAGSVER
GGTVSDFDAI ERRMQHSLTT SVMHLQHHDT RIHLLDTPGS ADFLGQSLPA LEAVETAAIV
INATTGVEPM ALRMMAYAAE RALDRIVIVN RIDAPGVKLA DVLAQIQAAF GRECLPLNLP
AAGGREVVDC WFAPEAQPGH EADFSSVAAA HRALVEQVVE VDGDFVERYL NDGDVATSEL
HAPLEQALRE GHLIPVLFVS ARTGAGVAQL LDVIEQLLPD PSEGNLPDFY QGEGDAARLM
HAAVDPAQHV LAHVFKVAID PYVGKMGIFR VHQGTVTANS QLYVGDGRKP FKVGHLFMLQ
GKDHVEVSRA LPGDIVAVAK VDEIAYDAVL HDAAEDDHIH LKPLNFPLPV HGLALKPRRH
GDEQRLAEVL AKLAAEDPCL RVEQVASTQE TVVYGLGELH LRVLLERLRE NYRVEVDTAP
PRIAYRETIT TSAQAQYRHK KQSGGAGQFG EVHLQVEPLP RGAGFEFVDV VKGGAIPGQY
IPAVEKGVRL AMDAGVIAGH PVVDVRVTVV DGKHHSVDSK EIAFVTAGKK AFIAAMREAQ
PIVLEPVVDV EITATDDHIG DITGDLASRR GEVRGTDRMA SGLASVRARA PLSELSGYQL
RLNALTRGEG RYTLAMSHYD AVPPNVQAEM VKGYQLRDED
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