Gene Lcho_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3711 
Symbol 
ID6162191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4151084 
End bp4151671 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID641666484 
Productrhodanese domain-containing protein 
Protein accessionYP_001792730 
Protein GI171060381 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0309402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC CCGCCCGCCT GCTCCTTGCC CTGTGTGCCA CCCTGGGCGC CAGCTTCGCC 
ACGCTGGCGC CTGTCCAGGC CGCCGAACCG GAGTTGCTGC GCATCATCGG CGAGGACAAG 
AAGTTCATCG TCCAGACCGC CAAGGGCCCG CTGGAGATCA CCCGCACGAT GACGCCCTGC 
GCCAAGAACA AGGGCTGGCT GCAGCCGCTG GTGCCGGTGG CCGGGGTGCA CCCGGTCGGC 
GAGATCGAGA TCCTGCATGC CCTCAACGAC CGCGACGCGA TGCTGGTCGA CATGCGCGAG 
TCGCAGGACC GCGTCAACGG CACCATCCCC AACTCGTATC ACATCCCCTA CACCGAGGTG 
GCCGGCCGGA TGGACGAACT GGGCTGCAAG AAGACCGGCA AGGGCTGGGA CTGCAGCAGC 
GCCAAGAAGG TCTACGCCTT CTGCAACGGC CCGGTCTGTC CGCAGAGCCC GACCGCCATC 
CTGGCCATGA CGCGCGACGG TTTCCCGGCC GACAAGATCT ATTACTACCG CGGCGGCATG 
CTCGACTGGG AGGCGCTGGG CTTCCCGGTG ATCAAGGGCG ATTTCTGA
 
Protein sequence
MTSPARLLLA LCATLGASFA TLAPVQAAEP ELLRIIGEDK KFIVQTAKGP LEITRTMTPC 
AKNKGWLQPL VPVAGVHPVG EIEILHALND RDAMLVDMRE SQDRVNGTIP NSYHIPYTEV 
AGRMDELGCK KTGKGWDCSS AKKVYAFCNG PVCPQSPTAI LAMTRDGFPA DKIYYYRGGM 
LDWEALGFPV IKGDF