| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3710 |
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| Symbol | |
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| ID | 6162190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4149979 |
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| End bp | 4150917 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666483 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001792729 |
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| Protein GI | 171060380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0234492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAACA CCCTGCAGTC GTCGGTCGGT CGACCCCTGA GTCGCGGTCT TCCCGCCCTT
GCCGTCGCCA CCGCCTTGTT GTTGACCGGC TGCCTGTCGA CCGCGCCCAA GCTGGGCGAG
AACAAGGGCA CCGTCAGCGG CGCGGCCGGT GGCGAGACGG CTGAAAACGC CAACAGCCAG
CTCGAGAAGT GCGAGGAATC GCTCGGCACG ATCGCGGTCC AGGAGGACAC CAACGCGCCC
TGGTACTTCC AGCTGCGCGA GCGCCAGCTG GGTTCGACCG TGCCGGTGAT CCGCCTGATG
ATCCAGCAGA GCAACTGCTT CGTGGTGGTC GAGCGCGGCG CCGGCATGAA CAACATGATG
GCCGAGCGCA ACCTTGAGAA GTCCGGCGAG ATGCGCGGCG GCAGCAACTT CGGCGGCGGC
CAGATGGTGT CGGCCGACTA CACCCTGCGC CCGGAAATCC AGTTCAGCGG CAAGACCGGC
GGCGGTGGCG GTTTCCTCGG CGGCGGCGCG CTCGGCCTGA TCGGCGCGGT GGCCGGCCAG
ATGGGCAAGA ACGAGGCGTC GACCACGCTG CTGCTGATCG ACAACCGTTC GGGCGTGCAG
ATCTCGGCCT CCGAGGGCAC CGGCTCCAAC TACGACTTCG GTCTGTTCGG CGCCGCCTTC
ACCGGCGGCC TGGGTGGCGG CGGTGGCGGC TACTCGAAGA CGCCGCAAGG CAAGGTGATC
GTGTCGGCGT TTGCCGACTC GTACAACCAG ATGGTCAAGT CGCTGCGCAG CTACAAGGCG
CAGACCGTCA AGGGTGGCCT GGGCACCGGC GGGCGCCTGG GTGTGGACGG CGGCACCACG
CCGGCCTCCA AGGAGCTGAC CAGCAAGCCC GCGCCGGCCG CACCGGTCAA GGCGCCGGCC
AAGGCGCCGG TCAAGAAGCC CGTCACGCCG ACCAAGTGA
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| Protein sequence | MENTLQSSVG RPLSRGLPAL AVATALLLTG CLSTAPKLGE NKGTVSGAAG GETAENANSQ
LEKCEESLGT IAVQEDTNAP WYFQLRERQL GSTVPVIRLM IQQSNCFVVV ERGAGMNNMM
AERNLEKSGE MRGGSNFGGG QMVSADYTLR PEIQFSGKTG GGGGFLGGGA LGLIGAVAGQ
MGKNEASTTL LLIDNRSGVQ ISASEGTGSN YDFGLFGAAF TGGLGGGGGG YSKTPQGKVI
VSAFADSYNQ MVKSLRSYKA QTVKGGLGTG GRLGVDGGTT PASKELTSKP APAAPVKAPA
KAPVKKPVTP TK
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