Gene Lcho_3695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3695 
Symbol 
ID6161093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4130559 
End bp4131557 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID641666468 
Productaldo/keto reductase 
Protein accessionYP_001792714 
Protein GI171060365 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTG CCCTGCCCCA GCGCCGCATC GGCGCCTTCG ACGTCTCGGC CATCGGCCTG 
GGCTGCATGA ACCTCAGCCA CGCCTACGGC CAGCCGCCCG CGCGTGACGC CGCGCAGGCG
CTGCTGCTGC GCGCGCTCGA CCTCGGCGTG ACGCTGTTCG ACACCGCCGC GCTCTACGGC
TTCGGCAGCA ATGAAGAGCT GGTCGGCGAG GTGCTCGCGC CGCACCGCCA TCGCTTCACG
CTGGCGAGCA AGTGCGGCAT GCAGGGCGTC GACGGCACCC GCGTGATCGA CGGCCGCCCG
GCCACGCTCA AGGCCACCTG CGAGGCCAGC CTGAAGCGCC TGCGCACCGA CGTGATCGAC
CTCTACTACC TGCACCGCTG GGACCGCCAG GTGCCGATCG AGGACTCGGT GGGCGCACTC
GCGGACTTGG TGCGCGAGGG CAAGATCCGC GCGATCGGCC TGAGCGAAGT CTCGGCCGCC
ACGCTGCGGC GGGCGCACGC GGTGCACCCG ATCGCCGCGC TGCAGACCGA GTACTCGCTG
TGGACCCGCA ACCCCGAGAT TGCCGTGCTC GAGGCCTGCC GCGAGCTGGG CACCACCTTC
GTCGCCTTCA GCCCGGTCGG GCGCGGCTTC CTGCCCGGCA CGTTGCGTGA CGTGAGCGGC
CTCGACGCGA AGGACATCCG ACGCGCCATG CCGCGTTTTG CGCCGGTCAA CTACGCCGCC
AACCTGCGTC TGCTCGACGG CCTGGGCGAG GTGGCGCGCG AGGTCGGCTG CACGCTCGCC
CAGCTCTCGC TCGCCTGGCT GCTGGCGCGC GACGAGCACA TCGTGCCGAT CCCCGGCACG
ACCCACATCG CCCACCTCGA AGAAGACCTC GGTGCCGTCG ACGTGCGGCT GAACGCGGCG
CAGATGGCGC GCCTGGACAC GCTGATCCAT CGCGGCAACG TGGCCGGCGC GCGCTACAAC
GCGGCCACGC AGACCGAGAT CGATACCGAG GAGTTCTGA
 
Protein sequence
MTPALPQRRI GAFDVSAIGL GCMNLSHAYG QPPARDAAQA LLLRALDLGV TLFDTAALYG 
FGSNEELVGE VLAPHRHRFT LASKCGMQGV DGTRVIDGRP ATLKATCEAS LKRLRTDVID
LYYLHRWDRQ VPIEDSVGAL ADLVREGKIR AIGLSEVSAA TLRRAHAVHP IAALQTEYSL
WTRNPEIAVL EACRELGTTF VAFSPVGRGF LPGTLRDVSG LDAKDIRRAM PRFAPVNYAA
NLRLLDGLGE VAREVGCTLA QLSLAWLLAR DEHIVPIPGT THIAHLEEDL GAVDVRLNAA
QMARLDTLIH RGNVAGARYN AATQTEIDTE EF