| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3658 |
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| Symbol | |
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| ID | 6161740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4084114 |
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| End bp | 4085070 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666431 |
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| Product | anaerobic benzoate catabolism transcriptional regulator |
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| Protein accession | YP_001792677 |
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| Protein GI | 171060328 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAGCA ATATAGTGCA TGCACCCGGG TTAACACCGA GCGCACTGCC CGGCCTCGAC
GGCGAGGACA AGAATCCCTT TCTGGTCGCG CTGGGCGAGC GGGTGCGCTC GCTGCGCGCG
CGTCGCGGCA TGACACGCAA GGCGGTGGCG ATCGCCGCCG ACGTGTCCGA GCGGCACCTC
GCCAATCTGG AATACGGCAT CGGCAACGCC TCGATCCTGG TGCTGCTGCA GGTGGCCGGC
GCGCTGCAGT GTTCACTGGC CGAACTGATC GGCGACATCA CGACCTCGAC ACCCGAATGG
CTGATGCTGC GCGAGCTGCT CGACGGCCGC GACGAGGCCA CCTTGCGCCG GGTGCGCGTG
GCGGTGGGCG ACGTGCTCGG CATGGGCGGC GACGGCAGCC GCGAGCGCGG CGGCAGCGCC
GCTCAGCGCA GCCCGCGGGT GGCGCTGATC GGCCTGCGTG GCGCGGGCAA GTCCACGCTC
GGGCAGATGC TGGCCGACGA CCTGGGTTAC CCGTTCGTCG AGCTCAGTCG CGAGATCGAG
AAGTTCGCCG GCTGCAGCAT CAGCGAGATC CAGGCGCTCT ACGGCCAGAA CGCCTACCGG
CGCTACGAAC GGCGCGCGGT CGAGGAGGCG ATCCAGATCT ACCCCGAAGC CGTGATCGCC
ACGCCGGGCG GCCTGGTGTC GGACGCCGCC ACCTTCAACC TGCTGCTCGA ACACTGCACC
ACCGTCTGGT TGCAGGCCGA CGCCGAAGAC CACATGAAGC GGGTGCGTGC GCAGGGCGAC
CTGCGGCCGA TGGCGGCCAG CCGCGAGGCG ATGGAAGACC TGCAGCGCAT CCTGGCCGGC
CGCGCCGCCT TCTATTCGAA AGCCGAGTTT CGGCTCGACA CCAGCGCCCA GGCGCTTGAA
CAGACGTTCC GGGCGCTGCG CCAGATGGTG CGCGCAGGAC TGCAAATCCC CGGGTAA
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| Protein sequence | MSSNIVHAPG LTPSALPGLD GEDKNPFLVA LGERVRSLRA RRGMTRKAVA IAADVSERHL
ANLEYGIGNA SILVLLQVAG ALQCSLAELI GDITTSTPEW LMLRELLDGR DEATLRRVRV
AVGDVLGMGG DGSRERGGSA AQRSPRVALI GLRGAGKSTL GQMLADDLGY PFVELSREIE
KFAGCSISEI QALYGQNAYR RYERRAVEEA IQIYPEAVIA TPGGLVSDAA TFNLLLEHCT
TVWLQADAED HMKRVRAQGD LRPMAASREA MEDLQRILAG RAAFYSKAEF RLDTSAQALE
QTFRALRQMV RAGLQIPG
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