Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3625 |
Symbol | |
ID | 6163261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4049072 |
End bp | 4049860 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641666398 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_001792644 |
Protein GI | 171060295 |
COG category | [R] General function prediction only |
COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00395759 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCGCT CGACGACCCC GGCCCAGTCA CTGCCCCCAC GGGCCGCGCC CGCCCTGGCC TGGACCCATC TGCGCCTGCG CCATCGCCGG ATGCTGGTCT GGCTGATGGC GACGGCGTCG GCCTGGATGC TGTTCGCCAA CTGGCCCGGC ATCGACCTGT CGATCAGCAC CGAACTGATG AACGCAGGCG GGCCGGATCA GCCGCGTTTT GCCTTCGGCC AATGGACCGC CGTGCGGGTG GTCTACGAGG TCGTGCCCTG GCTGGGCCGT GGCGCCCTGC TGGCGTGCCT GGTGCTGCTG ATGCTGCCGC GACCGGGCCG CCACAGCAGC GCCGCGCTGG GCCGCTGGCG ACAGCGCGCA CCCGCGATGC TGCTGGTGCT GGTGGTGGGC CTGTGGCTGG TGGTCAATGC CGGCTTCAAG GAGCACTGGG GCCGGCCGCG ACCGCAGCAT GTGGAGGTGC TGGGCGGGCA TCAGCCGTTC CGCTCGATCG CCGAGCCGAG CTCGCTGTGC GGCCGCAACT GCTCGTTTCC CAGCGGCCAC GCCGCCACCG GTTTCGTGGT GATGGCCGCC GGCCTGCGGG CCGGTGCCAG CCGCCGGCGC CGCTGGGCCT GGGCGGGGCT GATCCTGGGC ACGCTGGTCG GCCTGGGCCG CATGCTGCAG GGCGGCCATT TCGCCAGCGA CGTGGTGTTC GCCGGCCTGA TGATCTGGGG CGTGACCCTG GCCGCCCAGC AGATGCTGCT GCGCTGGCGC GCAGCACGCG GGCCTCAGAA CTCGAGCTGG CGCAGATAG
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Protein sequence | MNRSTTPAQS LPPRAAPALA WTHLRLRHRR MLVWLMATAS AWMLFANWPG IDLSISTELM NAGGPDQPRF AFGQWTAVRV VYEVVPWLGR GALLACLVLL MLPRPGRHSS AALGRWRQRA PAMLLVLVVG LWLVVNAGFK EHWGRPRPQH VEVLGGHQPF RSIAEPSSLC GRNCSFPSGH AATGFVVMAA GLRAGASRRR RWAWAGLILG TLVGLGRMLQ GGHFASDVVF AGLMIWGVTL AAQQMLLRWR AARGPQNSSW RR
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