| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3624 |
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| Symbol | |
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| ID | 6163260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4047312 |
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| End bp | 4049075 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641666397 |
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| Product | glycosyltransferase |
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| Protein accession | YP_001792643 |
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| Protein GI | 171060294 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00174163 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCACC CGCGGTCAGA TGCGGCCTGC TGGCTGCCGG TGCTGGCCGT TGTGATCGGC
CTGGCGGCGC TGCGGCTGGC CACCTTGCTG CTGGCGCTGC AGGACGGCGA CATCGGCCTG
CATGTCGACG AAGCCCAGTA CTGGCACTGG GCGCAGACCC TCGAATGGGG CTACTACTCG
AAGCCGCCGC TGATCGCGGC CCTGATCGCC GCGCTGACCG CGATCGGCGG CGACGGCCTG
ATCGCCGTCA AGTCCGCCGG CTGGCTGCTC TACCCGCTGA CGGCGCTGGT GCTGGCGTGG
CTGGCGCAGT CGCTGGCGCG CGCCGATCGG CACGACGGGC CAGCGCGCCC CGGCCCGTCG
GACCCGCCCG GGATGGCGCC CACCACGCTG GCGGCGCTGC TGGCCGCGAC GATCTTCCTG
ACCAGCCCGC TGGCCGCCCT GCTCGGTCTG GCCGCCACCA CCGACGCGCC GCTGCTGCTG
TTCTGGAGCC TGGCCAGCGC CTTGTTGTGG CGCGCCGGCC AGGCCACGGA TCGCCGCGAG
GCGCTGATCG CCTGGGCGCT GCTGGGGCTG GTCTGCGGCC TGGGTCTGCT GTCGAAATAC
AGCTTCGCGG CCTGGCTGCC CGGCGCGGCG TGGTGGCTGT GGCTGCGGCA CCGGTCTGCG
TCGCAAGGCG CCAGGCCGCC AGGCCTTGGC GCCGGCCCCT GGCTGGCGGG TGGGCTGATG
GTGTCGATGC TGCTGCCGCA TCTGCTGTGG AGCGCAGGAC AGGGCTGGCC GACGCTGCAG
CACACCGTCG AGATCACGAC CGCCGCGGCG CCGGCGGGCG ACACGGCCGG CCGGGGCGAT
GCGTCGTGGG CCGGCGCGCT CGCCCGCGTG GGCACCGTGC TCGGCGGCTT CTGCGTCATG
CTGGGGCCGC TGTGGCTGCT GTGGCTGCCC GTCTGGTTGC GCCCGGCTCC GGCACGCCGC
GCCGCGGTCG ACCGGTCGGC ACGCCATTTC GTCCTGACGC TGCACCTGCC GCTGCTGCTG
CTGGGCCTGG CCCAGGCCGT CGGCAGCACG CCGCAGATCA ACTGGACGGC GCCGCTGCAG
CTCGGCGGCG TGCTCTGGCT CGCGCTGCAG CTCTCGGCCC GGGCCCATGC CGCCACGCGC
TGGCAACGCA CCGCGCTGCT CGTCACCCTG GCGCTGCACC TGCTGGCCGG CACGGCGGTG
CCGCTGGCGC AGCGCCTCTG GACCGCACCG GTGTGGGCCG CCACCGGCAT CCCGACCGGC
GAGCCCGGCA CGGCGCTGCC ACGCCGCCTC GACATCTGGG CCCGCATGCG CGGCTGGCCG
CAGGCCTTTG CGCAGCTGCA TGACGCCGCG TCGGCCCACC TGCAGCACTG GCCCGGCAGC
CCGGTGATCG CCAGTTCGCG CACGCTGATC GCCCAAGGTG CCTACGAATG GCGCGACCTG
GGCGCGCACT GGATGGCCTG GGCGCCACCC GGTCCGGCCC ACAACCACTA CCAGCTCACC
GCGCGCTGGC CGCCTCCGGC CCGCGAAGGA CCGCGACCCG ACGGCGCGCC GTGCGACGAG
TCGGCCGAGC CGCTGCTGAT CGTCGCCGAC GCACCGCTGC CGGCGGGCCT GCTGGCGCAA
CTGGCGGCGC CGCGCCTGCT GGCCGAGGCC CGTGCCGCAG CGGCCGGCCA CTCGGTGGTC
CGGCTGCAGC TCTGGAGCGC CCGCAGCCGC TGCGCCGGCC GGTCCGCCCA CCCCATCCGC
ATCGACAGCC CCGCCCGCCC ATGA
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| Protein sequence | MSHPRSDAAC WLPVLAVVIG LAALRLATLL LALQDGDIGL HVDEAQYWHW AQTLEWGYYS
KPPLIAALIA ALTAIGGDGL IAVKSAGWLL YPLTALVLAW LAQSLARADR HDGPARPGPS
DPPGMAPTTL AALLAATIFL TSPLAALLGL AATTDAPLLL FWSLASALLW RAGQATDRRE
ALIAWALLGL VCGLGLLSKY SFAAWLPGAA WWLWLRHRSA SQGARPPGLG AGPWLAGGLM
VSMLLPHLLW SAGQGWPTLQ HTVEITTAAA PAGDTAGRGD ASWAGALARV GTVLGGFCVM
LGPLWLLWLP VWLRPAPARR AAVDRSARHF VLTLHLPLLL LGLAQAVGST PQINWTAPLQ
LGGVLWLALQ LSARAHAATR WQRTALLVTL ALHLLAGTAV PLAQRLWTAP VWAATGIPTG
EPGTALPRRL DIWARMRGWP QAFAQLHDAA SAHLQHWPGS PVIASSRTLI AQGAYEWRDL
GAHWMAWAPP GPAHNHYQLT ARWPPPAREG PRPDGAPCDE SAEPLLIVAD APLPAGLLAQ
LAAPRLLAEA RAAAAGHSVV RLQLWSARSR CAGRSAHPIR IDSPARP
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