Gene Lcho_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3617 
Symbol 
ID6163296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4039489 
End bp4040094 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content74% 
IMG OID641666390 
Producthypothetical protein 
Protein accessionYP_001792636 
Protein GI171060287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000150148 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCCAGT CCAGGACCGA CGCTGCCAGC ATCGACGACA GCCCCGCCGC AGCGCCGAGT 
GCACCGGCCG ACGCGGCCCC CGCCGCCGCC AAGGCGGTGC GCAAGCCGGC CAAGCGCGCC 
GGCGAGGCCC AGGCGGTCAA GCCGTCCGCT GAAGCGGACC CGGCAGCGCC CGTGAAGGCG 
GCCAAGCCGG CCAAGGTGGC CCCGGTCGCC AAGCCGGCCA AGGCCGTCAA GGCCGCGGCG 
GCCGAGCCGG TGAAACCCGC CAAGGCCGTC AAGGTGGCCA AGCCCGTCAA GCCCGCGAAA 
CCGGCCCAGC CCGCGGTGCT GCCGGAGGTG GCGCAGTCCA AGCCCCGGCT GGTGCGTGAC 
AGCTTCACCA TCCCCGAGCT CGAGTACGCC CAGCTCGAGG CCCTCAAGCG GCGCGCGCTG 
GCGCTGGCGC ATCACGCCAA GAAGAGCGAG GTGCTGCGTG CCGGCATCGC CACCCTGGCG 
GCGATGGACG ACGCCCAGCT GCTGGCGGCG CTGCAGTCGG TGCCGCCGCT CAAGACCGGT 
CGGCCCAAGA AGCCCAAGGC CGAGAAGGCC GCCGTCAAGG CCCGCAACGG CGGCAAGAAG 
AGCTGA
 
Protein sequence
MPQSRTDAAS IDDSPAAAPS APADAAPAAA KAVRKPAKRA GEAQAVKPSA EADPAAPVKA 
AKPAKVAPVA KPAKAVKAAA AEPVKPAKAV KVAKPVKPAK PAQPAVLPEV AQSKPRLVRD 
SFTIPELEYA QLEALKRRAL ALAHHAKKSE VLRAGIATLA AMDDAQLLAA LQSVPPLKTG 
RPKKPKAEKA AVKARNGGKK S