| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3603 |
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| Symbol | |
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| ID | 6161837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4022493 |
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| End bp | 4023680 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666376 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792622 |
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| Protein GI | 171060273 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.269205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA TCGACCTCGT CTATTTCAAC TATGGCGGCG GCCACCGTGC CGCCGCGCTG
GCGCTGCAGG GCGTGATCCG CACCACCCGG CCCGACTGGC GGGTTCGGCT GGTCGATCTG
GTCGAGGTGC TCGACCCGAA AGGCGCGTTC CGCAAGCTCA CCGGGCTGGC GCCGGAAGAC
CTCTACAACA AGCGCCTGGC GCGCGGCTGG ACGCTCGGGC TGACGCAGGA GCTCAAGCTG
GTGCAGGGTC TGATCCGGCT CGGCCACACG ACGCTGGTGC GGCGCCTCGC GCAGCACTGG
CTGGCGAGCG AGCCTGACCT GGTGGTCTCG CTGGTGCCCA ACTTCAACCG CGCGCTGTGC
GAGTCGGTGG CCGGCTCGCT GCCGGGCGTG CCGTTCGTGA CGGTGCTGAC CGACATGGCC
GACCATCCGC CCAACTTCTG GATCGAACCC GGCCAGGACC AGCACCTGGT GTGCGGCACG
CCGCATGCCG TGGCACAGGC GCGGGCGGCG GGGTATGCGC AGCGGCAGAT CTCGCTGACC
TCGGGGATGA TCCTGCGGCC GGCCTTCTAC GAAACCCCTC GCATCGACCG TGCCGCCGAG
CGCAGCGCGC TGGGCCTGGA CCCGGCGCGC CCGACCGGCA TCGTGATGTT CGGCGGCCAG
GGCTCGACGC AGATGGTGAC GATTGCCCGC GCCCTGGCCG ACCGCCAGCT GATCCTGATG
TGCGGCCACA ACGAGGCGCT GATCCGCAAG CTGAAGGCGC TGCAGCCGGC CATGCCGCAC
GCGGTGGTGG GCTTCACGCC CGACGTCTGC CGCTACATGC AGCTGGGCGA CTACTTCATC
GGCAAGCCCG GCCCGGGCAG CCTCAGCGAG GCGGTGCAGA TGAAGCTGCC GGTGATCACC
TTCGACAACG CCTGGACCAT GCCGCAGGAG CGCTACAACG CGCAGTGGGT GCGCGAGCAG
GGTGTCGGCC TGGTGCTGAA GTCGGTGCGT GCGATCGGCC CCGGCGTGAC CGAGATGATC
GAGCGCCTGC CCGCGCTGCG CGCGCGGGTG TGCACGATCG ACAACCGCGC CGTGTTCGAG
GTGCCGCAGA TCCTGGCGAT GCTGATCGCC CGCTCCGCCC AGGATCAGCC GGCGCTGTGT
TCGGGCGTGC CCGGCGGCAG CAGCGGGCTG TTGCCGTGCC GGGCATAA
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| Protein sequence | MKHIDLVYFN YGGGHRAAAL ALQGVIRTTR PDWRVRLVDL VEVLDPKGAF RKLTGLAPED
LYNKRLARGW TLGLTQELKL VQGLIRLGHT TLVRRLAQHW LASEPDLVVS LVPNFNRALC
ESVAGSLPGV PFVTVLTDMA DHPPNFWIEP GQDQHLVCGT PHAVAQARAA GYAQRQISLT
SGMILRPAFY ETPRIDRAAE RSALGLDPAR PTGIVMFGGQ GSTQMVTIAR ALADRQLILM
CGHNEALIRK LKALQPAMPH AVVGFTPDVC RYMQLGDYFI GKPGPGSLSE AVQMKLPVIT
FDNAWTMPQE RYNAQWVREQ GVGLVLKSVR AIGPGVTEMI ERLPALRARV CTIDNRAVFE
VPQILAMLIA RSAQDQPALC SGVPGGSSGL LPCRA
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