| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3592 |
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| Symbol | |
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| ID | 6162762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4010107 |
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| End bp | 4010826 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666365 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792611 |
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| Protein GI | 171060262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAG CAGGCTACAA GAACGAGATG CTGCGGATCT CGGATCTGCA CGCCTTCTAC
GGCGAAAGCC ACATCCTGCA CGGCATCGAC CTGCAGGTGA ACGAGGGCGA GCTGGTCACG
CTGCTGGGCC GCAACGGCTC GGGGCGTTCG ACCACGCTGA AGGCCGTCAT GGGCCTGGTC
GGGCGCCGCA CCGGCTCGGT GATGTTCAAC GGCAACGAGG TCACCGCCCT GGCGCCGCAC
CGCATCGCCC GCCTGGGTGT CGGTTATTGC CCCGAAGAGC GCGGCATCTT CGCCGGCCTG
TCGACCGAAG AGAACCTGAT GCTGGCGCCC GAGGTGCGCA GCGGCGGCAT GACGGTCGAG
GAGATCTACC AGGTCTTCCC CAACCTGCAC GAGCGCCGCC ACAGCCCCGG CACACGGCTG
TCCGGCGGCG AACAGCAGAT GCTGGCGATG GCGCGCATCC TGCGCACCGG TGCCCGCCTG
CTGCTGCTCG ACGAGATCAC CGAAGGCCTG GCGCCAGTGA TCGTCAAGAA GCTCGGCGAG
GTCATCCGGC TGCTCAAGAC CCGCGGCTAC ACCATCGTGC TGGTCGAGCA GAACTTCCGG
TTCGCCGCGC CGCTGGCCGA CCGCCACTAC GTGCTCGAAC ACGGCCGCAT CGTCGCCACG
GTGCAGAAAG ACGAATTGGC CGACAAGACC GAGATGCTGC ACCAGCTGCT CGGCGTCTAG
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| Protein sequence | MSGAGYKNEM LRISDLHAFY GESHILHGID LQVNEGELVT LLGRNGSGRS TTLKAVMGLV
GRRTGSVMFN GNEVTALAPH RIARLGVGYC PEERGIFAGL STEENLMLAP EVRSGGMTVE
EIYQVFPNLH ERRHSPGTRL SGGEQQMLAM ARILRTGARL LLLDEITEGL APVIVKKLGE
VIRLLKTRGY TIVLVEQNFR FAAPLADRHY VLEHGRIVAT VQKDELADKT EMLHQLLGV
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