| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3577 |
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| Symbol | |
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| ID | 6163147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3994179 |
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| End bp | 3995261 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666350 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792596 |
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| Protein GI | 171060247 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCG AAAGACGCAG CCAGGCTTCC GCCGCGGCAA TGCTGCTGGC GCCGGTGGGC
GCCGTGCTGT TCACGCTGGC GATCAGCGCG CTGCTGGTGC TGTGGGCCGG CGCGCCGGTC
GGGCGCACGT TTGCAGCGAT GTTCGCGGGC GGCTTCGGCT CGGTGTTCGC GTGGAGCGAA
ACGCTGACGC GCGCCGTGCC GCTGATCCTG ACCGGGCTGG CTGCCACGGT GGCGTTCAAG
GCGCGGCTGT TCAACATCGG CGCCGAGGGG CAGCTCTACG GCGGCGCGCT GGCGGCGGTA
GCGGTGGGCA GCCTGTTCGG CGAGAGCGGC TGGTGGTCGT CGAGCTGGCT GGTCTTCGTG
TCGATGCTGA TCGCCGCGGC GCTGGCCGGT GCGGCGCTGC TGCTGGGGCC CGTGCTGCTG
AAGGTGCGGC TGGGCGTCGA TGAAGTCGTC ACCACGCTGC TGATGAACTT CATCGTGCTG
CTGGCGGTGT CGGCGCTGCT CGACGGGCCG ATGAAGGACC CGAGCGCGCT CGGCTGGCCG
CAGAGCGTGG CGCTGCCCGC CGAGCTGGAA CTGGCGCGGC CGATCGAGGG CACACGCCTG
CACAGCGGCC TGTTCATGGC GACCGGCCTG GCCGGTGCGC TGTGGCTGAT CTTCAAACAC
TCGGTGCTGG GTTTCGACAT CCGCGCCACC GGCGCCAACG CCCGCGCCGC GGCGTTTGCC
GGCGTGCCGG CGCTGCGCAC CGCGGTGCTG GTGGCGCTGC TGTCGGGCGC ATTGGCCGGG
CTAGCCGGTG CGATCGAGGT GGCGGGCCGC GCCGGTTACG TCACGCTCGA CATGTCGCCC
GGCTTTGGCT ACACCGGCAT CGTCATCGCG ATGCTGGCCG GACTGCATCC GCTGGGCGTG
CTGGCGGCGA GCGTGTTCGT CGCCGGCGTG CTGGTCGGCG CCGACAGCAT GAGCCGCGCG
GTCGGCGTGC CGACCTACAT CGCCGACGTG ATCGTGGCGA CCTCGCTGAT CGCCGTGCTG
GTGGCCACGC TGCTGACGCA ATATCGTCTG CAACCGCGGC TGCGCACGGG CACCTCGACA
TGA
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| Protein sequence | MRLERRSQAS AAAMLLAPVG AVLFTLAISA LLVLWAGAPV GRTFAAMFAG GFGSVFAWSE
TLTRAVPLIL TGLAATVAFK ARLFNIGAEG QLYGGALAAV AVGSLFGESG WWSSSWLVFV
SMLIAAALAG AALLLGPVLL KVRLGVDEVV TTLLMNFIVL LAVSALLDGP MKDPSALGWP
QSVALPAELE LARPIEGTRL HSGLFMATGL AGALWLIFKH SVLGFDIRAT GANARAAAFA
GVPALRTAVL VALLSGALAG LAGAIEVAGR AGYVTLDMSP GFGYTGIVIA MLAGLHPLGV
LAASVFVAGV LVGADSMSRA VGVPTYIADV IVATSLIAVL VATLLTQYRL QPRLRTGTST
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