| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3550 |
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| Symbol | |
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| ID | 6160941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3971450 |
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| End bp | 3972286 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641666323 |
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| Product | redoxin domain-containing protein |
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| Protein accession | YP_001792569 |
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| Protein GI | 171060220 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.054429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGA TCTCACTCGG GCCCCTGGCC CTGCCGCTCG CGCCGGTGCT GCTGTTGCTG
TCGGGATGGG GGGCGTCGTG GCTGGCCTCG CGCCTGGCCG GGGGCGAGCG GGCCGCCGAG
GCCGGCAATG CCGTCATCAG CGCGCTGTGG CTGGGCCTGC TGGCCGCGCG CCTGGCCCAC
GTCGCGCTGG CGGCCGACCT CTATGCGGCC ACGCCGCTGG CCGTGCTGGA CGTGCGCGAC
GGCGGCTGGC ATGCGCCCAC CGGCGCGCTG GCCGGTGCGG CCTGGCTGTT CTGGCGCGGC
CTGCGCCGGC CGGCCTTGCG CCGCTCGCTC GGCCTGGGGG CATCGGCGGG CGCGCTGGCC
TGGCTGGCCG CGACCCACGT GCTGGGCGTG CAGCAGGCGC CGACGCTGGC GGCGCTGTCG
TCGATCCGGC TCACCGAGCC GACCGGTGCC ACGGCGACCG ATCTGGCGCA GGCCGCCCGC
GGCCGCCCGG TGGTCGTCAA CCTGTGGGCC AGCTGGTGCG GCCCGTGCCG GCAGGAGATG
CCCGTGCTGG CGGCGGCGCA GCAGCGCGAG GCGGCGGTCG GTTTCGTGTT CGTGAACCAG
GGCGAATCGG CGGCGGCGGT GCAGGCCTAT CTGACCGATC AGGATCTCGC GCTGCGCGAG
GTGCTGCTCG ATGCGGGCTC GCGGCTCGGC CCGGCGGTCG GCTCGCGCGG CCTGCCCACC
ACGCTGTTCT ACGACGCCGG CGGCCGGCTG GTCGATGCCC ATTTCGGCGT GCTCAACGCC
GTGGCGCTCG AAAGCCGGCT GCGGGTCTTG CGGGCCGGCG TCAGGACGGC ACCCTGA
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| Protein sequence | MLSISLGPLA LPLAPVLLLL SGWGASWLAS RLAGGERAAE AGNAVISALW LGLLAARLAH
VALAADLYAA TPLAVLDVRD GGWHAPTGAL AGAAWLFWRG LRRPALRRSL GLGASAGALA
WLAATHVLGV QQAPTLAALS SIRLTEPTGA TATDLAQAAR GRPVVVNLWA SWCGPCRQEM
PVLAAAQQRE AAVGFVFVNQ GESAAAVQAY LTDQDLALRE VLLDAGSRLG PAVGSRGLPT
TLFYDAGGRL VDAHFGVLNA VALESRLRVL RAGVRTAP
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