| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3540 |
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| Symbol | |
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| ID | 6160912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3957544 |
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| End bp | 3958470 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666313 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792559 |
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| Protein GI | 171060210 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000216262 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGAACG CGAGCGCCGC CGCCTTCGAG ACGCCCGCCG CGCGCCGCCG GCGCGAAAGC
CTGGGCCTGT GGCTCGGCCT GCTCGGCGTG GTGATCTTCG CGATGACCTT CCCGATGACC
CGGCTGGCGG TCGGCCCGCT CGACGCGCCG CAGCTGTCGC CGCTGTTCGT GACCGCCGCG
CGCGCCTGCG GGGCCGGGCT GCTGAGCCTG GCCTATCTGC GCCTGAGCCG TGCGGCGCGG
CCCGATCGCG ATGAATTCCG CCGTTATGCC GTCTGCGCCG CCGGCACCGT GATCGGCTTT
CCGCTGTTCG TCGGCCTGGC CTTGCGCGAG GTGCCGGCGA TGCACGCGGC CGTCGTCACC
GGCGTGCTGC CGCTGAGCAC GGCGCTGTTT GCGGCCTGGC ACCTGCGCCA GCGGCCATCG
CCGGCGTTCT GGGCGTGTGC CGGGCTGGGC TGCGCGCTGG TGATCGGCTT CGCGGTCTGG
CAGGGCGGTG GCGCGCCGGT GCTGGCCGAC CTCTGGCTGC TGCTGGCGGT GCTGAGCGCG
TCGGCCGGCT ACGTGGCTGG CGCGCAGCTG TCGGTGCGGC GGCCGGCCGA ACACGTCATC
AGCTGGGTGC TGGTCGGCAG CCTGCCGTCG ACCCTGCCGC TGACCGTCTG GAGCTGGCCG
CAGCAACCGG CCTTGCCGAC CGCCTGGGCG GCGCTCGGCT ACGTCACGGT CTTCTCGATG
TGGCTGGGTT TCTTCGCCTG GTACCGCGCG CTGGTGATCG GCGGCACGGT GCGCGTCAGC
CAGGTGCAGC TGGTGCAGCC TTTCCTGGCG CTGCTGATGG CGGTGCCGAT CCTGGGCGAG
CCGCTCGAAC CCGCCACCGT CGTGTTTGCG CTGGCCGTGC TGGCCACCGT GCTGCTGGGC
AAGCGCATGC CGGTGCAGCA GGCCTGA
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| Protein sequence | MPNASAAAFE TPAARRRRES LGLWLGLLGV VIFAMTFPMT RLAVGPLDAP QLSPLFVTAA
RACGAGLLSL AYLRLSRAAR PDRDEFRRYA VCAAGTVIGF PLFVGLALRE VPAMHAAVVT
GVLPLSTALF AAWHLRQRPS PAFWACAGLG CALVIGFAVW QGGGAPVLAD LWLLLAVLSA
SAGYVAGAQL SVRRPAEHVI SWVLVGSLPS TLPLTVWSWP QQPALPTAWA ALGYVTVFSM
WLGFFAWYRA LVIGGTVRVS QVQLVQPFLA LLMAVPILGE PLEPATVVFA LAVLATVLLG
KRMPVQQA
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