Gene Lcho_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3535 
Symbol 
ID6161275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3953390 
End bp3953884 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID641666308 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001792554 
Protein GI171060205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0151129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA TCTCGCCGGA TACACCGGCC TTGATCGACG CTGCGCGCGA GCTGTTCCGG 
GAGTACGCCC AGAGCCTCGC GGTGGATCTG TGTTTCCAGG GCTTCGAATC CGAACTGGCC 
GGCCTTCCGG GTGACTACGC CGAGCCGGCC GGCGCCCTGC TGCTGGTGCT GGTCGACGGC 
GAGCTGGCAG GGTGCGGGGC CTTCCGGCCG CTGCCCGATG CCGATCTGCC CAATGCCTGC 
GAGATGAAGC GCCTGTATGT GCGCCCCGCC TTTCGCCGCT ACGGCCTGGG CCGGCTGCTG 
GCTCAGCAGC TGATCGATCA GGCGCGAGAA GCGAGTTATT CGCGGATGTA CCTCGACACC 
CTGGACGACA TGGAGTCGGC CCGAGAGCTC TACGCGACGC TCGGCTTCCA TGAGGTTGCG 
CCGTACTACT TCAATCCGAT TCCCGGCGCG CATTACCTGT GTGTCGATCT CGACCGCAGC 
GTCACGCGCT ATTGA
 
Protein sequence
MRLISPDTPA LIDAARELFR EYAQSLAVDL CFQGFESELA GLPGDYAEPA GALLLVLVDG 
ELAGCGAFRP LPDADLPNAC EMKRLYVRPA FRRYGLGRLL AQQLIDQARE ASYSRMYLDT 
LDDMESAREL YATLGFHEVA PYYFNPIPGA HYLCVDLDRS VTRY