| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3459 |
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| Symbol | |
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| ID | 6159894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3862026 |
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| End bp | 3863003 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666234 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001792482 |
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| Protein GI | 171060133 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.151094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAACC GCCCCAACTT TGACAAGATC GAGCTTCATC TTGTCCGGGT CTTGCACACC
GTGATCACCG AACGCAGCGT GTCGCGAGCA GCGATGCGCC TGGCCACCAC CCAACCCGCC
GTCAGCGCCC AACTCAAGCG CCTGCGTGCC CTCACCGGCG ACCCGCTGCT GGTGCGTGCC
GGCACCGGCA TGGTGCCCAC CGAGGTGGCG CTGCAGCTGA TGGGCCCGGC CGAGACGCTG
TTGCGCAGCG CCGAGCAGCT GTTCGGCGGC AAGTTCGGCG AGCGCGCGTT CGGCGCGTTC
TCGCCGCAGA GCCAGGCGGT GGAGTTCCGC ATCGCGGCGA GCGACTACCT CGACCCCACA
TTCCTGCCCA CGCTGGTGGC GCGCATCAAG CACGAGGCGC CGATGGCGCA GCTGACGATC
CACGCGCTGT CGGCCGACTA CGACTACCGC GCCCGGCTGG CGCGTGGCGA GGTCGACCTG
GTGATCGGCA ACTGGCTCGA ACCCCCCGGC GAGCTGCACC TCGGGCGGCT GTTTTCCGAC
GAGATCGTCT GCCTGGTCGG GCAGGATCAC GCCGCCGTGC GCAACCCGCG CAGCTGGACG
CTCGATCGCT ACCTCGACGC CGAGCACGTC GCCCCGACCG CGCTGCATGC CGGCGCACGC
GGCGTGATCG ACGAACACCT GCAGCGCCTG GGCAAGAGCC GGCGCATCGC GGTGCGCAGC
CCGCACTTCG CGCTGGTGCC GCTGATGCTG GCGCAAACTC AGCTCGTGCT CACCACCGGC
CGGCTGTTCT GCCAACGTTA TGTCGACCTG CTGCCCCTGC GCATCGTGCG CTGCCCCGTC
AACTTTCCCA GCATGACCTA CTACCAGCTC TGGCACGACG TCAGCCACAG TGCCTCGTCC
CTGCGCTGGC TGCGCGAAAC CGTGCGCGAC GTCGCACGAG GCCTCAGCCC GTCCAAGGCG
AACGGGAAAT CGGCATGA
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| Protein sequence | MDNRPNFDKI ELHLVRVLHT VITERSVSRA AMRLATTQPA VSAQLKRLRA LTGDPLLVRA
GTGMVPTEVA LQLMGPAETL LRSAEQLFGG KFGERAFGAF SPQSQAVEFR IAASDYLDPT
FLPTLVARIK HEAPMAQLTI HALSADYDYR ARLARGEVDL VIGNWLEPPG ELHLGRLFSD
EIVCLVGQDH AAVRNPRSWT LDRYLDAEHV APTALHAGAR GVIDEHLQRL GKSRRIAVRS
PHFALVPLML AQTQLVLTTG RLFCQRYVDL LPLRIVRCPV NFPSMTYYQL WHDVSHSASS
LRWLRETVRD VARGLSPSKA NGKSA
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