| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3456 |
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| Symbol | |
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| ID | 6159873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3858035 |
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| End bp | 3859120 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666231 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792479 |
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| Protein GI | 171060130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0696875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC TTGAAGCGCG CCCGCAGCCG TCGCGGGTCA TGTCGCTGGC CTCGCCGCTG
CTGGCGCTGG TGATCACGGT GCTGCTGGGC ATCGTGCTGT TCCTGCTGCT GGGCAAGGAC
CCGGTGCGCG GCCTGCAGAT GTTCTTCGTC GAGCCGCTCA AGAACGCCTA CGCGCTGTCG
GAGCTGAGCG TGAAGGCGGT GCCGCTGGTG CTGATCGCGC TCGGCCTGGC GGTGTGTTTC
CGCTCCAACC TGTGGAACAT CGGCGCCGAG GGGCAGTACA TCCTGGGCGC GCTGGCCGGC
GGCTGGGTGG CGATGCAGGC CGGGCCCGAG ACGGCCTGGA TGGGCCGCGG CATCGTGGTC
GCGATCCTGC TCGCGGGCGT GCTGGGCGGC ATGGTCTGGG CCGGCATCGT GGCGCTGCTG
CGCGACCGCT TCAACGCCAG CGAGATCCTC GTCAGCCTGA TGCTGGTGTA CGTGGCCGAG
ATGGTGCTGA GCTACCTGGT CTACGGGCCG TGGAAGGACC CGCTGGGCTA CAACTTCCCG
CAGACCATCA CCTTCGACGC CATCACCAAG GTGCCGCGCC TGATCGACGG TCTGCGCCTG
AACGCCGGCA CGCTGATCGC GCTGGTGGCG GTGGCGGCGT TCACGGCCTT CCTGTTTCGC
ACCTACCGCG GCTTCGCGCT GCAGGTCGGC GGGCTGGCGC CGGCGGCGGC GCGTTACGCC
GGTTTCTCGT CGCGCACCGC GCTGTGGACG GCCTTGCTGA TCTCGGGCGG CATGGCCGGC
CTGGCCGGTG CGCTCGAAGC CGCCGGGCCG CTGGGGCAGC TGACGCCCTA CGTGCCGGCG
GGCTACGGCT TCGCCGCCAT CATCGTCGCC TTCGTCGGCC GGCTGCATCC GGTCGGCATC
GTGTTCTCGG CGGTGCTGAT GAGCATGTTC TACATCGGCG GCGAGCTGGC GCAGTCGCGC
CTGGGCCTGC CGAAATCGCT GACCGGCGTG TTCCAGGGCC TGCTGCTGTT CTCGCTGCTG
GCCTGCGACA CGCTGATCGC CTACCGCATC CGCTGGGTGC GGCCGCAACT CCTCAAGACC
GCCTGA
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| Protein sequence | MLKLEARPQP SRVMSLASPL LALVITVLLG IVLFLLLGKD PVRGLQMFFV EPLKNAYALS
ELSVKAVPLV LIALGLAVCF RSNLWNIGAE GQYILGALAG GWVAMQAGPE TAWMGRGIVV
AILLAGVLGG MVWAGIVALL RDRFNASEIL VSLMLVYVAE MVLSYLVYGP WKDPLGYNFP
QTITFDAITK VPRLIDGLRL NAGTLIALVA VAAFTAFLFR TYRGFALQVG GLAPAAARYA
GFSSRTALWT ALLISGGMAG LAGALEAAGP LGQLTPYVPA GYGFAAIIVA FVGRLHPVGI
VFSAVLMSMF YIGGELAQSR LGLPKSLTGV FQGLLLFSLL ACDTLIAYRI RWVRPQLLKT
A
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