| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3455 |
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| Symbol | |
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| ID | 6159872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3857096 |
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| End bp | 3858016 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666230 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792478 |
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| Protein GI | 171060129 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0440389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAA TCGCCTTGCT GATCGCCGCG ACGCTGAGCG CCGGCACCGT GCTGGCCATC
GCCGCACTCG GCCTGCTGAT CAACGAACGC GCCGGCATCC TCAACCTGGG GGCCGAAGGG
ATGATGCTGG TGGCGGCCAT CGCCGGCTTC GCCACCTCGG TGCACACCGG CAACGACTGG
CTGGCGTTCG GCGCCGGGGC CATTGCCGGC GCCTTGATGG CGGCCGTCTT CGGCCTGCTG
GTGATCTGGC TCAACACCAA CCAGTACGCG ACCGGCCTGG CGCTGAGCCT GTTCGGCGCG
GGCTTCTCGG CCTTTCTCGG CATCCGCTAC ACGCAGGAAA AACTGGCCCA GCGGCCGAGT
TTCGAGGTGC CGCTGCTGGC CGACCTGCCT TTCGTCGGCC CGGCCTTCTT CAAGCATCAC
CCGATGGTCT ACCTGACCGT CCTGTTCGTG TTCGCGCTGA TGTGGTTCCT CTACCGCTCG
CGCGCCGGGC TGGTGCTGCG CGCCGTCGGC GAGTCGCCCG AGTCGGCGCA TGCGCTGGGT
TATCCGGTGC GGCGCATCCG CCTGGCCGCC GTGATGGTGG GTGGCGCGCT GTGCGGGGTC
GCGGGGGCCT ATCTGTCGGT GATCTACACG CCGCTGTGGG TCGAGGGCAT GACGGCCGGC
AAGGGCTGGA TCGCGCTGGC GCTGACCACC TTCGCGACCT GGCGGCCGGC GCGCGTGCTG
CTGGGCGCCT ACCTGTTCGG CGGCGTGACG ATGCTGCAGT TCCACCTGCA GGGCGAGGGC
GTGCAGATCG CCAGCCAGGT GCTGACGATG CTGCCCTACA TCGCCACCAT CGTCGTGCTG
GTGCTGATCT CGCGCAACCC GGCCTGGATC CGCGCCAACA TCCCGGCCTC GATCGGCAAG
CCGTTTTTCC CGGGCAGCTG A
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| Protein sequence | MNEIALLIAA TLSAGTVLAI AALGLLINER AGILNLGAEG MMLVAAIAGF ATSVHTGNDW
LAFGAGAIAG ALMAAVFGLL VIWLNTNQYA TGLALSLFGA GFSAFLGIRY TQEKLAQRPS
FEVPLLADLP FVGPAFFKHH PMVYLTVLFV FALMWFLYRS RAGLVLRAVG ESPESAHALG
YPVRRIRLAA VMVGGALCGV AGAYLSVIYT PLWVEGMTAG KGWIALALTT FATWRPARVL
LGAYLFGGVT MLQFHLQGEG VQIASQVLTM LPYIATIVVL VLISRNPAWI RANIPASIGK
PFFPGS
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