| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3433 |
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| Symbol | |
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| ID | 6163127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3834789 |
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| End bp | 3835544 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666208 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001792456 |
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| Protein GI | 171060107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00135571 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCCCG TCGACCCCTC CTTCCAGACC GCATCGCGGC CGACGCGCGA GCCGCTGCGC
CAGCGCGCGC GCGCCGCCAC CCGCGACGAA CTCGAGATGG TGCCGTGGCT GAGGGTGCTG
GCAGTCGACG AACGCGAGCG GGTGATCGCC GACCTGCAGG TGGTGGATGC GGCGGTGGGC
GACTTCGTCT GCAAGATCGG CCGGCCGGCG AGCTTCTGGT TCGGCGTGGT CGACGGCCTG
CTCAAGATGA GCAACGACAG CTCGGTCGGC ACCTCGATCA CCTTCACCGG CGTGCCGCCG
GGCGCCTGGT TCGGCGAGGG CACGCTGCTC AAGCGCGAGG TCTACCGCTA CAACATCGAG
CCCTTGCGCA AGAGCGTGGT GGCGGGCTTG CCGGCCACCA CCTTCGAGTG GCTGCTCGAC
CGCAGCATCG CCTTCAACCG CTACGTGATG AACCAGCTCA ACGAGCGGCT CGGCCAGTTC
ATCGCCGCGC GCGAGATCGA CCGCCTCAAC GACCCCGACA CCAAGGTGGC GCGCGGCCTG
GCCGCGCTGT TCCACCCGGT GCTCTACCCC GGCGTGGGCG AGGTGCTGCG CATCACGCAG
CAGGAGCTGG CGTATCTGGT CGGGCTGTCG CGCCAGCGGG TCAACGAGGC GCTGAAGACG
CTGCAGGCGC AGGGCCTGAT CCGCATCGAA TACGGCGGCC TGCGGGTGCT CGACCTGGCC
GGCCTGCGGC GCGTGCTGCA CCGTGCACCG GAATGA
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| Protein sequence | MAPVDPSFQT ASRPTREPLR QRARAATRDE LEMVPWLRVL AVDERERVIA DLQVVDAAVG
DFVCKIGRPA SFWFGVVDGL LKMSNDSSVG TSITFTGVPP GAWFGEGTLL KREVYRYNIE
PLRKSVVAGL PATTFEWLLD RSIAFNRYVM NQLNERLGQF IAAREIDRLN DPDTKVARGL
AALFHPVLYP GVGEVLRITQ QELAYLVGLS RQRVNEALKT LQAQGLIRIE YGGLRVLDLA
GLRRVLHRAP E
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