| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3382 |
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| Symbol | |
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| ID | 6163366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3760272 |
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| End bp | 3761480 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666157 |
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| Product | amidohydrolase |
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| Protein accession | YP_001792405 |
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| Protein GI | 171060056 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGA CCGAACCCCG CCTGATCGCC TCGCTGGTCG AGCAAGCCCC CGGCCTCGCC
CGCATCCGGC GCGACATCCA CGCCCATCCC GAGCTGTGTT TCGAGGAGGT GCGCACCGCC
GACGTGGTGG CGCGCCAGCT CACCGAATGG GGCATCCCGA TCCACCGCGG GCTGGGCAAG
ACCGGCGTGG TCGGCATCAT CAAGAGTGGC ACGTCGGACC GCGCCATCGG CCTGCGCGCC
GACATGGACG CGCTGCCGAT GACCGAGCAC AACCGCTTCG AACACGCCAG CCGCCACCCC
GGCAAGATGC ACGCCTGCGG CCACGACGGC CACACCGCGA TGCTGCTGGC CGCGGCCCAG
CACCTGGCGA AACACCGCGA TTTCGACGGC ACCGTCTACC TCGTCTTCCA GCCCGCCGAA
GAAGGCGGCG GCGGCGCGCG CGAGATGATG CGCGACGGCC TGTTCGAGCG TTTTCCGATG
CAGGCGATCT TCGGCATGCA CAACTGGCCG GGCATGGCGG CGGGGCAGTT CGCGGTCTGC
AAGGGGCCGA CGATGGCGTC GAGCAACGAG TTCCACATCA CCATCACCGG AAAGGGCTCG
CACGCCGCGC TGCCGCACAA CGGCGTCGAC CCGGTGCCGA TCGCCTGCCA GATGGTGATG
GCCTTCCAGA CCATCGTGAC GCGCAACAAG CGCCCGACCG ACGCGGCGGT GATCTCGGTG
ACGATGATCC ACACCGGCGA GGCCACCAAC GTGGTGCCCG ACAGCTGCGT GATCCAGGGC
ACGGTGCGCA CCTTCACGCT CGACGTGCTG GACATGATCG AGCAGCGCAT GCGCACGGTG
GCCGAGCACA CCTGCACGGC GTTCGGGGCG AGCTGCGAGT TCGACTTCAA GCGCAACTAC
CCGCCCACCG TGAACCATCC CGACGAGGCC GAGTTCGTGC GCGGCGTGAT GCAGCAGGTG
GTGGGCAAGG CCGACACGCT GGAGTTCCAG CCGACCATGG GCGCGGAGGA TTTCAGCTTC
TTCCTGCTCG AAAAACCGGG CGCCTATTTT GTGATCGGCA ATGGCGATGG CGATCACCGC
GAGCAGGGCC ACGGCCTGGG CCCGTGCAAC CTGCACAACC CGAACTACGA CTTCAACGAC
ACGCTGATCC CGCTCGGCGC CACCTTGTGG GTGCGGCTGG CCGAGCGCTG GCTGGCGGTG
CAGAAATGA
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| Protein sequence | MSPTEPRLIA SLVEQAPGLA RIRRDIHAHP ELCFEEVRTA DVVARQLTEW GIPIHRGLGK
TGVVGIIKSG TSDRAIGLRA DMDALPMTEH NRFEHASRHP GKMHACGHDG HTAMLLAAAQ
HLAKHRDFDG TVYLVFQPAE EGGGGAREMM RDGLFERFPM QAIFGMHNWP GMAAGQFAVC
KGPTMASSNE FHITITGKGS HAALPHNGVD PVPIACQMVM AFQTIVTRNK RPTDAAVISV
TMIHTGEATN VVPDSCVIQG TVRTFTLDVL DMIEQRMRTV AEHTCTAFGA SCEFDFKRNY
PPTVNHPDEA EFVRGVMQQV VGKADTLEFQ PTMGAEDFSF FLLEKPGAYF VIGNGDGDHR
EQGHGLGPCN LHNPNYDFND TLIPLGATLW VRLAERWLAV QK
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