Gene Lcho_3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3371 
Symbol 
ID6161040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3747965 
End bp3748210 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content67% 
IMG OID641666146 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_001792394 
Protein GI171060045 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA AGAGCGCCCC TGCATCCGTC CCTGCCGAAC CCGCCAGCTA CGAGCAGGCA 
CTGCAGGAAC TGGAGCGGCT GGTGGTCAGC ATGGAAAACG CCCAACTGCC GCTCGACCAG
CTGCTCGACA GCTACAAGCG CGGCGCCCAG CTGCTGAGCC ACTGCCGCGC CCGGCTCGAA
GCCGTCGAAC AGCAGGTGCA GGTGCTCGAG GCCGGACAAC TCAAGCCCTG GAACGACGCC
CCATGA
 
Protein sequence
MPTKSAPASV PAEPASYEQA LQELERLVVS MENAQLPLDQ LLDSYKRGAQ LLSHCRARLE 
AVEQQVQVLE AGQLKPWNDA P