| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3342 |
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| Symbol | |
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| ID | 6161255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3719663 |
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| End bp | 3720451 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666117 |
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| Product | 4-oxalocrotonate decarboxylase |
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| Protein accession | YP_001792365 |
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| Protein GI | 171060016 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | [TIGR03218] 4-oxalocrotonate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGA ATCGCACCGA CATCGAGGCG CTGGCCGCCC ACCTGGAATC GGCCGAGCTG
GAGGCGCGCG ACGTCACCAA GATCACCGAC GATTTTCCGC TGATGGACTG GGCCGATGCC
TACGACATCC AGGACGAGAT CCGCCGCCGC AAGGAAGCAC GCGGCCACAA GACCGTGGGC
CTGAAGGCGG GCCTGACCTC GTTCGCCAAG ATGAAGCAGA TGGGCGTGGA CACGCCGTGT
TTCGGCTTTG TCAGCGACTA CATGGCGCGC CCGGATGGCG GCGAGATCAA GGTCTCCGAG
CTGATCCACC CGAAGGTGGA GGCCGAGATC TGCATCGTCA CGAAAGCGCC ATTGCGGGGC
CCCGGTTGCC ACGTTGGCGC GGTGCTGGCG GCGATCGACT TCGTGCTGCC GGCGGTCGAG
ATCATCGACA GCCGCTACCG CGACTTCAAG TTCGACTTGA AGAGCGTGAT CGCCGACAAC
ACCTCGGCCT CGCGCTTCGT GATCGGCGGG CGCTCGCGCA ATGTCGAGGC GCTCGATCTG
CGCACGCTCG GCGTGGTGCT GGAGAAGAAC GGCCAGATCG TCTCGATGGC CGCCGGCGCC
GCGGTGCTGG GGCATCCAGC CGCGGCGGTG GCGATGATGG CCAACCACCT GGGCGCACGC
GGCCAGGAGA TCCCGGCCGG CACGTTCATC ATGACCGGCG GCGTGACCGA AGCGATCGCG
GTGCAGGCCG GCGACAGCGT CAACGTGCGC TTCCAGGACC TCGGCTCGGT GTCGATGCGT
TTCGTCTGA
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| Protein sequence | MALNRTDIEA LAAHLESAEL EARDVTKITD DFPLMDWADA YDIQDEIRRR KEARGHKTVG
LKAGLTSFAK MKQMGVDTPC FGFVSDYMAR PDGGEIKVSE LIHPKVEAEI CIVTKAPLRG
PGCHVGAVLA AIDFVLPAVE IIDSRYRDFK FDLKSVIADN TSASRFVIGG RSRNVEALDL
RTLGVVLEKN GQIVSMAAGA AVLGHPAAAV AMMANHLGAR GQEIPAGTFI MTGGVTEAIA
VQAGDSVNVR FQDLGSVSMR FV
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