| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3341 |
|---|
| Symbol | |
|---|
| ID | 6161254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3718729 |
|---|
| End bp | 3719646 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641666116 |
|---|
| Product | acetaldehyde dehydrogenase |
|---|
| Protein accession | YP_001792364 |
|---|
| Protein GI | 171060015 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4569] Acetaldehyde dehydrogenase (acetylating) |
|---|
| TIGRFAM ID | [TIGR03215] acetaldehyde dehydrogenase (acetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TCAAGTGCGC CCTGATCGGG CCCGGCAACA TCGGCACCGA CCTGCTCGCC
AAGCTGCAAC GCAGCGCCGT GCTGGAGCCG GTCTGGATGG TCGGCATCGA CCCCGAATCC
GACGGCCTCA AACGCGCCCG CGAGATGGGC ATCAAGACCA CGTCTGACGG CGTCGACGGA
CTGATTCCGC ACATGAAGGC CGACGGTGTG CAGATCGTCT TCGACGCCAC CAGCGCCTAC
GTGCACGCCG AGAACTCGCG CAAGGTCAAC GAACAAGGCG CGCTGATGAT CGACCTGACA
CCCGCGGCGA TCGGGCCGTT CTGCGTGCCG CCCGTCAACC TGAAGGCGCA TGTCGGCTCG
GGTGAGATGA ACGTCAACAT GGTGACCTGC GGCGGGCAGG CCACGATCCC GATGGTGGCG
GCGGTTTCGC GTGTCCAGCC GGTGGCGTAT GGCGAGATCG TCGCCACCGT GTCGAGCCGC
TCGGTCGGAC CGGGCACACG CAAGAACATC GACGAGTTCA CTCGCACCAC GGCCGGTGCG
GTCGAGAAGG TCGGTGGCGC CAGGAAGGGC AAGGCCATCA TCGTCATCAA CCCGGCCGAG
CCGCCGCTGA TGATGCGCGA CACGGTGCAT TGCCTGACCG AAACCGAGCC CGATCAGGCC
GCGATCACAG CCAGCGTGCA CGCCATGCTG GCCGAGGTGC AGAAGTACGT GCCGGGCTAC
CGGCTGGTCA ACGGGCCGGT GTTCGACGGC AACCGTGTGA GCGTGTTCCT GGAGGTCGAA
GGCCTGGGCG ACTACCTGCC CAAGTACGCC GGCAACCTCG ACATCATGAC GGCCGCCGCC
GCCCGCACCG CCGAGATGTT CGCCGAGGAA ATCCTCAAGG GTGAACTGGT CCTGCAACCC
ACCGCCGTTG CGGCCTGA
|
|---|
| Protein sequence | MKKIKCALIG PGNIGTDLLA KLQRSAVLEP VWMVGIDPES DGLKRAREMG IKTTSDGVDG
LIPHMKADGV QIVFDATSAY VHAENSRKVN EQGALMIDLT PAAIGPFCVP PVNLKAHVGS
GEMNVNMVTC GGQATIPMVA AVSRVQPVAY GEIVATVSSR SVGPGTRKNI DEFTRTTAGA
VEKVGGARKG KAIIVINPAE PPLMMRDTVH CLTETEPDQA AITASVHAML AEVQKYVPGY
RLVNGPVFDG NRVSVFLEVE GLGDYLPKYA GNLDIMTAAA ARTAEMFAEE ILKGELVLQP
TAVAA
|
|---|
| |