| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3333 |
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| Symbol | |
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| ID | 6160767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3711919 |
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| End bp | 3712863 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666108 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001792356 |
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| Protein GI | 171060007 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCA GACGCATCGA CGGTCTGTGG TCGCACATGC ACTGGCTGAC GGTGCTGGGC
GATCTGGGCA GCTACACCGC CGCCGCGCAG CGCCTGGGCG TCAGCAAGGC GGCGATGAGC
CAGCACATCG CCGACCTGGA GCGCGCCGCC GGCGTGCCGC TGGTCAGCCG CACCACCCGC
AGCGTGCGCC TGACCGAAGC CGGCCAGCAG CTCGCCGACG CCACCCGCGG CGCCTTCGAG
CAGATCGAGC GCGGCCTGGC CGGCGTGAAG GACCTGGCCA CCACGCCGCG CGGCCTGCTG
CGCGTGACCG CGCCGGTGGC GCTGGGGCGC CAGCAGATCG TGCCGAGGCT GCCGGACTTC
CTGCGCGCAC ATCCGGAGGT GCGCATCGAG CTGGTGCTCA ACGACCAGGT GCTGTCGCTG
GCACAGGAGG GCTTCGACCT GGCGATCCGG CACACCGCCC GGCCGCCCGA AACCCATGTC
GCCTGGACGC TCACCACCAC CCGCTCGGTG CTGGTCGCCA GCCCCGACTA CCTGCAGCGC
CGCGGCCGAC CGCAGCATCC CGCCGAGCTC GCCACCGAAC GCGGCCAGCA CGACTGCCTG
CACTACCCGC GCCCCGGCGA GACGCCGACC TGGCAGTTTC AGCCGCGGCA GGCCGCGCTC
GCGCCGGTGA CGGTGGCCGT GCGCGGCCCG CTCAGCGCCA ACAACAGCGA GGTGCTGCGC
GAGGCCGCGA TCGACGGGCT GGGCATCGCG CTGCTGCCCG ATTTCAGCGC CCAGGCGGCG
CTGCGCAACG GCGCGCTCGA GGCGGTGCTG CCGCAATGGA AGCCGGTCGG CAGCTTCGGC
GAGTTCCTGT TCGCGATCCG GCCCTACAGC CCCTACGTGC CACGCGCCGT GCACGCCCTG
GTGGCGTACC TGCGCACCAC GCTGCAGGCG GGTTTCGGCA CCTGA
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| Protein sequence | MEARRIDGLW SHMHWLTVLG DLGSYTAAAQ RLGVSKAAMS QHIADLERAA GVPLVSRTTR
SVRLTEAGQQ LADATRGAFE QIERGLAGVK DLATTPRGLL RVTAPVALGR QQIVPRLPDF
LRAHPEVRIE LVLNDQVLSL AQEGFDLAIR HTARPPETHV AWTLTTTRSV LVASPDYLQR
RGRPQHPAEL ATERGQHDCL HYPRPGETPT WQFQPRQAAL APVTVAVRGP LSANNSEVLR
EAAIDGLGIA LLPDFSAQAA LRNGALEAVL PQWKPVGSFG EFLFAIRPYS PYVPRAVHAL
VAYLRTTLQA GFGT
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