| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3331 |
|---|
| Symbol | |
|---|
| ID | 6163718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3709076 |
|---|
| End bp | 3710215 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641666106 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_001792354 |
|---|
| Protein GI | 171060005 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2017] Galactose mutarotase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG CCCGAATCGC CACGCCGATC GACTCCGATG CCGACCCGGA CGAACCGGAG
GCCGCAATCC AGGTGCTGCA CTGGCCCGGC GGCTTGCGCG TGAAGCTGTC GCCATGGGGC
GCGGCGTGGC TGAGCTGCTG CGTGCCGATG CCCGACGGCG ACTGGCGCGA AGCCCTGCTG
CAGCCACGCC ACGCCCGCAT CGGGCCGGCG CAGCCACGCA GTTTCATGGG CAGCACGCTC
GGCCGCTACG CCAACCGCAT CGCGCACGGG CGCCTCGCGC GGGGCGATCA GGTGGTGTCG
CTCGCACGGG GCGACGGCGA ACGGCATCAC CTGCACGGCG GGCCGGACGG CTGGGACACG
CGGCGCTGGG CGCAGCCGGC GGTGGCCGCG ACGGACGATG CGCTGGAGGC CGTCTACACG
CTAACGTCGG TGGCCGGCGA CCAGGGCTAC CCCGGCACGG CTCAGGCGCA GGTGCGCTAC
CGGCTGATCG ATGCGCAGAC GCTGGAGATC GACTACGAGG TGCGGGTCGA CGCACCGTCA
CCGATCGGGC TCAGCAACCA CGCCTACTTC AACCTCGATG CGCGCCAGGC GGGGGACGCC
GGCGACGTGC GCGACCACCA CCTGCAGATC CACGCCGATC GGGTGCTGCC GGTCGATCCG
GACTGCATCC CGCTGGAAGG GCCGGTGCCG GTGGCCGATC TGCCGGGTTT CGATTTCCGC
CGCGCGACAC GGCTGCGAAC GCAGCTGGAC GGACATCTGG ATGCGAGCGA ACAGCTGCGA
GCGCAACGCG GCCATGACCA TGCCTACGTG CTGGAATCGA CCGAGGATGC CGCTGCAGGA
GACAGCCCGG ACAGGCTGCG CGAGGCGGCG GTGCTGAGCG CAGCCGACGG CCGGCTGCAG
ATGACGCTGA GCACCACGCT GCCGGCCCTG CAGCTCTACA CCGGCCAGCT CCTGGCCGGC
TCGCCGGCGC CGGGCGGTCG CACGCACCAC GCCCATGCCG GGCTGGCGCT GGAGCCGCAG
TACCTGCCCG ACAGCCCGAA CCGGCGCTGG GCCGCAGCCG GCACGCCGGG CGACTGCTGG
CTGCTGCCGG GTCAGGTGTG GCGGCAGCGC ATCCGCTACC GCTTCACCAC CGCGGGCTGA
|
|---|
| Protein sequence | MTHARIATPI DSDADPDEPE AAIQVLHWPG GLRVKLSPWG AAWLSCCVPM PDGDWREALL
QPRHARIGPA QPRSFMGSTL GRYANRIAHG RLARGDQVVS LARGDGERHH LHGGPDGWDT
RRWAQPAVAA TDDALEAVYT LTSVAGDQGY PGTAQAQVRY RLIDAQTLEI DYEVRVDAPS
PIGLSNHAYF NLDARQAGDA GDVRDHHLQI HADRVLPVDP DCIPLEGPVP VADLPGFDFR
RATRLRTQLD GHLDASEQLR AQRGHDHAYV LESTEDAAAG DSPDRLREAA VLSAADGRLQ
MTLSTTLPAL QLYTGQLLAG SPAPGGRTHH AHAGLALEPQ YLPDSPNRRW AAAGTPGDCW
LLPGQVWRQR IRYRFTTAG
|
|---|
| |