| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3305 |
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| Symbol | |
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| ID | 6161534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3672233 |
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| End bp | 3673285 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666080 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001792328 |
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| Protein GI | 171059979 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC GCCCGACCCT CACCGCAGTG GCCGCGGCGG CCGGCGTCAG CACCGCCACC
GTCGACCGCG TGCTCAACAG CCGCCTGCCG GTGCGCGAGG CCACCGCCTT GCGCGTGATC
GAGGCGGCCG AGCGCATCGG CTATCACGGC GCCCGGCTGA TGCGCGCGCG CCTGCTCGAA
CGTGGCGAGC GCACCGTGCG CACGCTGGGT TTCTGCCTGC AAAAACGTGG CGATCCGTTC
TACCAGGCGT TCGGCCGGGC CTTCTCGACG GCAGCCGCCC GCCACACGCC CGAGCAGTGC
GTGGCGGTGG TCGAGTTCAT GGACCAGCTC GAACCCGCCT CGATCGCCGA CGCGCTGCTC
AACCTGGGCA CCGAGTGCGA CGCGCTGGCG GTGGTGGCGG TCGATCACCC GCACGTCACC
GCCGCGATCG AAGCGCTGCA CGCGATGGGC AAGCCGGTGC TGACGCTGCT GTCCGACCTG
AGCGCGCCGC AGCGCACCGC CTACGTCGGC ACCGACGCGC GCAAGAGCGG GCGCACCGCG
GCGTGGGCGA TCACACGGCT GGCGCGTGGC GAGGGCTCGG TCGGCGTGTT CGTCGGCAGC
CACCGCTATC TGGGGCAGGA GACCAGCGAG ATCAGCTTTC GCAGCTACCT GCGCGAACAC
GCGCCGCAGC TGCGCCTGAT CGACACCCAG GTCAACCTCG AGGACGACCA GCTCGCCTTC
GAGGCCACGC TGGCGATGCT GGCGCGCCAC CCCGACCTGC GCGGCATCTA CGTGGCCGGC
GGCGGCGTGG TCGGCATCAT CCGCGCGCTG CGCGAGGAGC AGGCCCAGCT GCGCACGCCG
CACATCGTGA CGGTCTGCTG CGAACTGATG CCCACCCAGC GCGCCGCCCT GATCGACGGC
GTGATCGACC TGGTGATCGA CACGCCCACC GCACGCATCG CCGAAACCGC CGTCGAGGTG
ATGCTGCGCG CGCTCGAAGC CCCTGCCGAC GCACCGCTGC TGGCGCAGCA GTATCCGCAG
CCGTTCGATC TGTACACGGC GGAGAACGTC TGA
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| Protein sequence | MSRRPTLTAV AAAAGVSTAT VDRVLNSRLP VREATALRVI EAAERIGYHG ARLMRARLLE
RGERTVRTLG FCLQKRGDPF YQAFGRAFST AAARHTPEQC VAVVEFMDQL EPASIADALL
NLGTECDALA VVAVDHPHVT AAIEALHAMG KPVLTLLSDL SAPQRTAYVG TDARKSGRTA
AWAITRLARG EGSVGVFVGS HRYLGQETSE ISFRSYLREH APQLRLIDTQ VNLEDDQLAF
EATLAMLARH PDLRGIYVAG GGVVGIIRAL REEQAQLRTP HIVTVCCELM PTQRAALIDG
VIDLVIDTPT ARIAETAVEV MLRALEAPAD APLLAQQYPQ PFDLYTAENV
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