| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3301 |
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| Symbol | |
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| ID | 6162212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3668659 |
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| End bp | 3669534 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666076 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001792324 |
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| Protein GI | 171059975 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC CCATGATGCC CACGCTGGCA CGCCGCGCGC TGCACTACGT GCTGCTGAGC
TGGATCGCGC TGATCTTCAT CTTCCCGATC GTCTTCATGA TCGTGTCGTC GCTCAAGCCC
GACCTGCAGC TGCTGCAGGA CGCCAGCTCG CTGCGCGCCT TCCTGCCGGT GGGCGACATC
TCGCTCGACA ACTACCGCGC GGCCTTCCAG CGCGTGCCGA TCGGCCACTT CATCGTCAAC
TCGGTGATGG TCACGGCGAT CACGATGGTG CTGTCGCTGG CGATCTGCTC GATGGCGGCG
TTTGCCTTCG TGTTCCTGGA GTTCCCGGGC CGCAACCTGC TGATGGCGGT GGTGCTGGCC
ACCTTCATCG TGCCCTTCGA GTCGATCGCC ATCCCGCTGC TGCTGGTGGT CAACAACCTG
CCGTGGATCG GCGCGGACGG CCTCACGATC GGCTGGCTCA ACTCGTACCA CGTGCAGATC
ATCCCGTTCG TGTCGGACGC GCTGACGATC TACCTGTTCG TCCAGTACTT CCGCGACCTG
CCGCGTGATC TGGTCGAGGC CGCCCGCGTC GACGGCGCGA GCTACTTCCA GATCTACCGC
CGCGTGATCG TGCCGCTGGC CGGCCCGGTG TTCGCGACCG CCGCGATCCT GAAATTCCTC
GCCATGTACA ACCAGTACCT GTGGCCGGTG ATGTCGGCCC AGTCGGAGGA CTACCGCCCG
ATCATGGTCG GCCTGCAGTA CTTCTTCCAG CTCAACATCG CCTGGGGCGA AATGATGGCC
TACCTGACCG TCATCACGGT GCCGGTGCTG CTGTTCTACC TGAGCCTGCA GCGCGCGTTC
ATCGCCTCGA TCGCCTCCAC CGGGGTCAAG GGTTGA
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| Protein sequence | MSHPMMPTLA RRALHYVLLS WIALIFIFPI VFMIVSSLKP DLQLLQDASS LRAFLPVGDI
SLDNYRAAFQ RVPIGHFIVN SVMVTAITMV LSLAICSMAA FAFVFLEFPG RNLLMAVVLA
TFIVPFESIA IPLLLVVNNL PWIGADGLTI GWLNSYHVQI IPFVSDALTI YLFVQYFRDL
PRDLVEAARV DGASYFQIYR RVIVPLAGPV FATAAILKFL AMYNQYLWPV MSAQSEDYRP
IMVGLQYFFQ LNIAWGEMMA YLTVITVPVL LFYLSLQRAF IASIASTGVK G
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