| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3298 |
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| Symbol | |
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| ID | 6162209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3664798 |
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| End bp | 3665964 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666073 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001792321 |
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| Protein GI | 171059972 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACG TTGTCATTTG TCCGGATTCC CTCCTTTCCC AGAACCCCAT GGCCACCATC
TTCGACGTCG CGCAGCTCGC GGGGGTCTCG ATCAAGACCG TCTCGCGGGT CGTCAATCGC
GAGCCACGCA TCAGCCCGGA GACCTTCGAG AAGGTCAGCC GCGCGATCGA GATGCTGGGC
TACGAGCCGC ACCGCGGCGC GCGCCTGATG CGCTCGGGCA AGTCGGGGCT GATCGGCTTC
ATCACCGGCC TGTTCAGCGA CATCGAGATC GCCCAGACCC GCGCCGGCCT GTCGGACCTG
AGCATCCTGC GCGGCGCCCA GCAGGCCTGC CGCGCCGCCG GCAAGACGCT GCTGGCCGCC
GACATGGGCA CCGGCCGTAG CCGCGACGCC GACGCGGTGG CCAAGCTGCT CAAGACCTTC
GCCTCGCATC GCGTCGAGGG CGTCATCTAC GCCGCGCCCT ATCACCAGCA GGTCTTGCTG
CCGCCGCTGA AGGACACGCC GCTGCTGCTG GTCAACTGCT TCGACCTGGA CCACACCCCG
GCGGTCGTGC CCGACGACGG CCTCGGCCAG GCCCGCGTGG TCGATCACCT GGTGGCCCAG
GGCCATCGGC GCATCGGCTA TGTCGGCGTC GACGAGAACA TGGTGGCGGG GCGGCTGCGC
AAGGCGGCGT TCCTGGACGC CTGCGCGCGG CACGGGCTCG ACCCGGCGCA TTGCCCGGCG
CTGATCGGCT CGACGCTGCA GACCCCGGAC CCGTTCACGC CGCTGCGCCC GGCGCTGCAG
CAGATCGTCG GCCGCACGCC GCGTCCCACC GCGCTGTGCC TGGGCAACGA CGTGATGGCG
CTGGAGGCGA TCCGCGAGCT GGAGACGCTG GGCCTGCGCG TGCCGCAGGA CATCGCCGTG
ATCGGCTACG ACAACGACGA GGTGATCTGC GAGGTCACCC GCCCGCGCCT GAGCACCGTC
GTGCTGCCCT ATTTCGAGAT GGGCCAGATC GCGGTGCAGC GCCTGCTGGA ACGCATCGCC
GGCGAGCCCG CGCCGGCCGA AGCCTGGCAG CGCGTCGCCG GCGAAGTGAT CGCGCGCGAC
TCGGTGTCGG CGCTCGCCCC CGTATCCACA GCGGACACGC CCGCCGCGTC CACGTCAACC
CCCACACCTG CCGCCTCATT GCCATGA
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| Protein sequence | MSNVVICPDS LLSQNPMATI FDVAQLAGVS IKTVSRVVNR EPRISPETFE KVSRAIEMLG
YEPHRGARLM RSGKSGLIGF ITGLFSDIEI AQTRAGLSDL SILRGAQQAC RAAGKTLLAA
DMGTGRSRDA DAVAKLLKTF ASHRVEGVIY AAPYHQQVLL PPLKDTPLLL VNCFDLDHTP
AVVPDDGLGQ ARVVDHLVAQ GHRRIGYVGV DENMVAGRLR KAAFLDACAR HGLDPAHCPA
LIGSTLQTPD PFTPLRPALQ QIVGRTPRPT ALCLGNDVMA LEAIRELETL GLRVPQDIAV
IGYDNDEVIC EVTRPRLSTV VLPYFEMGQI AVQRLLERIA GEPAPAEAWQ RVAGEVIARD
SVSALAPVST ADTPAASTST PTPAASLP
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