| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3238 |
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| Symbol | |
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| ID | 6161671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3590507 |
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| End bp | 3591583 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666012 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001792261 |
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| Protein GI | 171059912 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCA CGCCTGCCCT GTTGTCGAAA ACGTCCGGCC TTGCCGCGGA ACTCGTCCAT
CACAAGGACC TCTTGCCGCA TGTCAAGGAA GCCCGTCTCG ACGACGATGG CGGCGTTGCT
GGTGTCGGTC TGTGCGCGCG CCACAAGGTG CACAGCCTCA CGCACAGGTT GGCGCGTGCG
CTGCAGGTCC CGCAGCGCCG CCTTGCCGGC GGCACGGTCG GCCTGCTGAT CCCCAAGGCC
GCTCACCTCC ATGTCGACGT CTTCCTGGCG CAGCTCGGGG CTTGTGTCCA CGGCATCTGC
CAGGAGGTGG GGCTCGATCT GTTGATCGAG ACCACCGATG ACCTGGGGGC CGAGCCGGTC
GCCTGCCTTG ACCGGCTGCG CTCTCGCGGC ATAGGCGGAC TGATCGTCGT CAATCCGCGG
GGCGAGGACT ACGGCTTGCT GCATCGCCTG GCCGATGCCG GTGTCGCGCT GGTGGTGTTC
GGCGCCGGTC TGCCCGGGCT GGAGCGCTTT GCGGCGCTGG GCTGCGACAG CCCCGGCGCG
GTGCGGCTGC TGATGCGGCA CCTGCAGCAG CTGGGTCATC GCCGCATCGG CCACGTGAGC
TACGCGCCGG CCGAGTTCGT GCTGGTCGAC GAGCGGGTGC GCGGCTGGAC GGAGGCGTTG
CTGGCCGATG GCGTGAGGCC CGAGCCGGCC TGGCTCGTGC ACGCCGACAT CAGCGCGGCC
AGCGGTTATC AAGCCACTCG CAGCCTGCTG GCGCAGCAAC GGCCACTGCC CGCAGCGCGG
CGCATCACCG CGCTGTTCGC GGGCAACGAC ACGATCGCCT TCGGTGCCCT GCGTGCCGTG
CGCGAGGCCG GCCTGCAGGT GCCGAGCGAC ATCGCCGTCG TCGGCTTCGA CGATATTCCG
CTGGCGGCCT ACGCCGATCC GCCGCTGACG ACGGTGCGCA CCGATCCGAT CGGCCATGGC
CGCGAGGCGA TGGCGCTGCT GCTGGCGCAA CTGCGCGGAC TGCGAGCACC ACCCACACAC
TGGCTGGAGC GGCCCGAGCT GGTGGTGCGT GCGTCTTGCG GGGCGGTGCG TGGCTGA
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| Protein sequence | MDTTPALLSK TSGLAAELVH HKDLLPHVKE ARLDDDGGVA GVGLCARHKV HSLTHRLARA
LQVPQRRLAG GTVGLLIPKA AHLHVDVFLA QLGACVHGIC QEVGLDLLIE TTDDLGAEPV
ACLDRLRSRG IGGLIVVNPR GEDYGLLHRL ADAGVALVVF GAGLPGLERF AALGCDSPGA
VRLLMRHLQQ LGHRRIGHVS YAPAEFVLVD ERVRGWTEAL LADGVRPEPA WLVHADISAA
SGYQATRSLL AQQRPLPAAR RITALFAGND TIAFGALRAV REAGLQVPSD IAVVGFDDIP
LAAYADPPLT TVRTDPIGHG REAMALLLAQ LRGLRAPPTH WLERPELVVR ASCGAVRG
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