| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3237 |
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| Symbol | |
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| ID | 6161670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3589439 |
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| End bp | 3590470 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666011 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001792260 |
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| Protein GI | 171059911 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA TCGCGCGCCT GGTAGGCGTA TCGATCGCGA CCGTCTCGCG CGCCTTGAGC
GGCAATCGCG GGGTTGGCGC CGAAACGCGC GCCCGCATCG AGGCCCTGGC CCGCTCGCTG
AACTACGCGG TCAACGTCGG CGCGCAGAAC CTGCGCCTGA AGCAGAACCA CACGGTCGCG
GTGATCGTGC CCTTCGACGC GATCTCACGC GAGCACCTCT CCGACCCCTT CTTCCTCAGC
CTGATCGGCA GCATCGCCGA TGCCCTGACC CACAGCGGCT ACGACATGCT GCTGTCGCGC
ATCGATTCCG AGCGGCTCGA CCTGGCGGCA CACACGATCG AAACCGGCCG TGCCGCGGCC
GCCATCCTGA TCGGTCAATG GCACAGCCAC GACCAGCTCA ACGCGATGGC GCAACGGGGC
GTGCCTTTCG TCGTCTGGGG CGGCCACATG GCCAGACAGC TCTATGTCAC GGTCGGGACC
GACAACCTGC ACGGCGGCCA TCTCGCCGCC ACCCACCTGC TCGATCAGGG CGCCAGGCAC
ATCGCCTTCG TCGGCGACCC GGGCCTGCCC GAGATCGCCC AGCGCCGGGC CGGCTACCTG
CGCGCCCACC AGGATCGTGG CCTGGAAGCC GACCCACGGC TGATGCGCAC CCTGCCCTTC
CTCAGCGAAC GCATACACGC CGATCTCGAG GCCCTGCTGG CCACCGGCAC CCTGCTGGAC
GGCATCGTCG CAGGCAGCGA CCTGTGTGCA ATGAGCGCGA TCAACACGCT GCGCCGCGCC
GGCCGGCGGG TACCCGGGGA CGTGGCCGTG GTCGGCTACG ACGACATCGA GCTGGCGGCG
CATTTCAATC CGGCCCTGAC AACCGTCCGG CAACCGATCG CGCAAGCAGG TCGAGCCCTG
GTCGACAGCG TCATGGCCAT GCTGGCAGGA CACAGGCCGG CGTCGGTGAT CCTGCCCACC
GAACTGGTGC AGCGCGAGTC GAGCCGGCCG GTCCGGGCAA GCAGCCTCGG ACGTGCAAAG
ACCGGCAGGT AG
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| Protein sequence | MADIARLVGV SIATVSRALS GNRGVGAETR ARIEALARSL NYAVNVGAQN LRLKQNHTVA
VIVPFDAISR EHLSDPFFLS LIGSIADALT HSGYDMLLSR IDSERLDLAA HTIETGRAAA
AILIGQWHSH DQLNAMAQRG VPFVVWGGHM ARQLYVTVGT DNLHGGHLAA THLLDQGARH
IAFVGDPGLP EIAQRRAGYL RAHQDRGLEA DPRLMRTLPF LSERIHADLE ALLATGTLLD
GIVAGSDLCA MSAINTLRRA GRRVPGDVAV VGYDDIELAA HFNPALTTVR QPIAQAGRAL
VDSVMAMLAG HRPASVILPT ELVQRESSRP VRASSLGRAK TGR
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